Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF139Q8WU17 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF139Q8WU17 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.5■■□□□ 1.51
RNF139Q8WU17 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF139Q8WU17 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF139Q8WU17 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RNF139Q8WU17 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
RNF139Q8WU17 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF139Q8WU17 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.49■■□□□ 1.51
RNF139Q8WU17 MIR4281-201ENST00000580852 62 ntBASIC24.49■■□□□ 1.51
RNF139Q8WU17 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.49■■□□□ 1.51
RNF139Q8WU17 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RNF139Q8WU17 AC142381.3-201ENST00000568208 1670 ntBASIC24.49■■□□□ 1.51
RNF139Q8WU17 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RNF139Q8WU17 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
RNF139Q8WU17 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RNF139Q8WU17 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF139Q8WU17 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF139Q8WU17 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
RNF139Q8WU17 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RNF139Q8WU17 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF139Q8WU17 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.47■■□□□ 1.51
RNF139Q8WU17 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF139Q8WU17 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RNF139Q8WU17 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RNF139Q8WU17 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF139Q8WU17 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.47■■□□□ 1.51
RNF139Q8WU17 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.47■■□□□ 1.51
RNF139Q8WU17 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
RNF139Q8WU17 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF139Q8WU17 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF139Q8WU17 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
RNF139Q8WU17 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RNF139Q8WU17 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF139Q8WU17 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.46■■□□□ 1.51
RNF139Q8WU17 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RNF139Q8WU17 BX664725.1-201ENST00000438252 379 ntBASIC24.46■■□□□ 1.51
RNF139Q8WU17 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.46■■□□□ 1.51
RNF139Q8WU17 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RNF139Q8WU17 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
RNF139Q8WU17 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.45■■□□□ 1.5
RNF139Q8WU17 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RNF139Q8WU17 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF139Q8WU17 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
RNF139Q8WU17 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF139Q8WU17 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.44■■□□□ 1.5
RNF139Q8WU17 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF139Q8WU17 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF139Q8WU17 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF139Q8WU17 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF139Q8WU17 AC138932.3-201ENST00000567634 1902 ntBASIC24.43■■□□□ 1.5
RNF139Q8WU17 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
RNF139Q8WU17 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF139Q8WU17 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF139Q8WU17 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF139Q8WU17 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF139Q8WU17 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF139Q8WU17 AC239859.2-201ENST00000444165 318 ntBASIC24.43■■□□□ 1.5
RNF139Q8WU17 Z92544.1-202ENST00000571933 1220 ntBASIC24.43■■□□□ 1.5
RNF139Q8WU17 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.43■■□□□ 1.5
RNF139Q8WU17 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF139Q8WU17 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF139Q8WU17 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF139Q8WU17 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF139Q8WU17 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF139Q8WU17 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RNF139Q8WU17 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF139Q8WU17 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF139Q8WU17 KRT125P-201ENST00000546827 989 ntBASIC24.42■■□□□ 1.5
RNF139Q8WU17 AC137630.3-201ENST00000607245 391 ntBASIC24.42■■□□□ 1.5
RNF139Q8WU17 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF139Q8WU17 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
RNF139Q8WU17 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RNF139Q8WU17 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF139Q8WU17 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RNF139Q8WU17 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF139Q8WU17 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF139Q8WU17 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF139Q8WU17 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF139Q8WU17 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.41■■□□□ 1.5
RNF139Q8WU17 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF139Q8WU17 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF139Q8WU17 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF139Q8WU17 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF139Q8WU17 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RNF139Q8WU17 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.4■■□□□ 1.5
RNF139Q8WU17 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF139Q8WU17 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
RNF139Q8WU17 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
RNF139Q8WU17 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.4■■□□□ 1.5
RNF139Q8WU17 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF139Q8WU17 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.39■■□□□ 1.5
RNF139Q8WU17 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
RNF139Q8WU17 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
RNF139Q8WU17 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
RNF139Q8WU17 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
RNF139Q8WU17 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
RNF139Q8WU17 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.39■■□□□ 1.49
RNF139Q8WU17 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RNF139Q8WU17 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms