Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 AC137630.3-201ENST00000607245 391 ntBASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDND2Q8NHS1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDND2Q8NHS1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLDND2Q8NHS1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.75■□□□□ 0.75
CLDND2Q8NHS1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDND2Q8NHS1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDND2Q8NHS1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 MIR4281-201ENST00000580852 62 ntBASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLDND2Q8NHS1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDND2Q8NHS1 AC021242.3-201ENST00000607598 1377 ntBASIC19.72■□□□□ 0.75
CLDND2Q8NHS1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDND2Q8NHS1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDND2Q8NHS1 UNC93B8-201ENST00000511903 705 ntBASIC19.72■□□□□ 0.75
CLDND2Q8NHS1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDND2Q8NHS1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.72■□□□□ 0.75
CLDND2Q8NHS1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDND2Q8NHS1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDND2Q8NHS1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDND2Q8NHS1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDND2Q8NHS1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.71■□□□□ 0.75
CLDND2Q8NHS1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CLDND2Q8NHS1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.71■□□□□ 0.75
CLDND2Q8NHS1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDND2Q8NHS1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDND2Q8NHS1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDND2Q8NHS1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDND2Q8NHS1 KRT16P3-201ENST00000439127 1283 ntBASIC19.7■□□□□ 0.74
CLDND2Q8NHS1 TSPY9P-201ENST00000440215 945 ntBASIC19.7■□□□□ 0.74
CLDND2Q8NHS1 TSPY11P-201ENST00000442607 1045 ntBASIC19.7■□□□□ 0.74
CLDND2Q8NHS1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDND2Q8NHS1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
CLDND2Q8NHS1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDND2Q8NHS1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLDND2Q8NHS1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CLDND2Q8NHS1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDND2Q8NHS1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDND2Q8NHS1 AC092803.2-201ENST00000564287 1899 ntBASIC19.69■□□□□ 0.74
CLDND2Q8NHS1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDND2Q8NHS1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDND2Q8NHS1 AC011551.1-201ENST00000614101 683 ntBASIC19.69■□□□□ 0.74
CLDND2Q8NHS1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDND2Q8NHS1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDND2Q8NHS1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDND2Q8NHS1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDND2Q8NHS1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDND2Q8NHS1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.68■□□□□ 0.74
CLDND2Q8NHS1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDND2Q8NHS1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDND2Q8NHS1 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDND2Q8NHS1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDND2Q8NHS1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDND2Q8NHS1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDND2Q8NHS1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDND2Q8NHS1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDND2Q8NHS1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDND2Q8NHS1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms