Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NUP43Q8NFH3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.83■■□□□ 1.09
NUP43Q8NFH3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.83■■□□□ 1.08
NUP43Q8NFH3 HLA-L-211ENST00000482052 1765 ntBASIC21.82■■□□□ 1.08
NUP43Q8NFH3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
NUP43Q8NFH3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.82■■□□□ 1.08
NUP43Q8NFH3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NUP43Q8NFH3 ATP5G2P3-201ENST00000429083 425 ntBASIC21.82■■□□□ 1.08
NUP43Q8NFH3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
NUP43Q8NFH3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NUP43Q8NFH3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NUP43Q8NFH3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
NUP43Q8NFH3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NUP43Q8NFH3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NUP43Q8NFH3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NUP43Q8NFH3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NUP43Q8NFH3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.81■■□□□ 1.08
NUP43Q8NFH3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.81■■□□□ 1.08
NUP43Q8NFH3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.81■■□□□ 1.08
NUP43Q8NFH3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUP43Q8NFH3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NUP43Q8NFH3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NUP43Q8NFH3 AC141586.4-201ENST00000624558 1573 ntBASIC21.8■■□□□ 1.08
NUP43Q8NFH3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUP43Q8NFH3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NUP43Q8NFH3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NUP43Q8NFH3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NUP43Q8NFH3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NUP43Q8NFH3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.8■■□□□ 1.08
NUP43Q8NFH3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NUP43Q8NFH3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.79■■□□□ 1.08
NUP43Q8NFH3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP43Q8NFH3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.79■■□□□ 1.08
NUP43Q8NFH3 BHLHE23-202ENST00000612929 1109 ntBASIC21.79■■□□□ 1.08
NUP43Q8NFH3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP43Q8NFH3 AC090877.2-201ENST00000558441 1738 ntBASIC21.79■■□□□ 1.08
NUP43Q8NFH3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NUP43Q8NFH3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUP43Q8NFH3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUP43Q8NFH3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUP43Q8NFH3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.78■■□□□ 1.08
NUP43Q8NFH3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUP43Q8NFH3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUP43Q8NFH3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NUP43Q8NFH3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUP43Q8NFH3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUP43Q8NFH3 TSPY13P-201ENST00000338964 914 ntBASIC21.77■■□□□ 1.08
NUP43Q8NFH3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NUP43Q8NFH3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.77■■□□□ 1.08
NUP43Q8NFH3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NUP43Q8NFH3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.77■■□□□ 1.08
NUP43Q8NFH3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NUP43Q8NFH3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.77■■□□□ 1.08
NUP43Q8NFH3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NUP43Q8NFH3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.77■■□□□ 1.08
NUP43Q8NFH3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NUP43Q8NFH3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUP43Q8NFH3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.76■■□□□ 1.07
NUP43Q8NFH3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NUP43Q8NFH3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NUP43Q8NFH3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NUP43Q8NFH3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUP43Q8NFH3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.75■■□□□ 1.07
NUP43Q8NFH3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NUP43Q8NFH3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NUP43Q8NFH3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.75■■□□□ 1.07
NUP43Q8NFH3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.75■■□□□ 1.07
NUP43Q8NFH3 AC019171.1-201ENST00000601251 1056 ntBASIC21.75■■□□□ 1.07
NUP43Q8NFH3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NUP43Q8NFH3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.75■■□□□ 1.07
NUP43Q8NFH3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUP43Q8NFH3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUP43Q8NFH3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUP43Q8NFH3 AC012354.3-201ENST00000623734 483 ntBASIC21.74■■□□□ 1.07
NUP43Q8NFH3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUP43Q8NFH3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUP43Q8NFH3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUP43Q8NFH3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.74■■□□□ 1.07
NUP43Q8NFH3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUP43Q8NFH3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUP43Q8NFH3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUP43Q8NFH3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUP43Q8NFH3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUP43Q8NFH3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.73■■□□□ 1.07
NUP43Q8NFH3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUP43Q8NFH3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUP43Q8NFH3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUP43Q8NFH3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUP43Q8NFH3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.73■■□□□ 1.07
NUP43Q8NFH3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUP43Q8NFH3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NUP43Q8NFH3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
NUP43Q8NFH3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NUP43Q8NFH3 AC074183.2-201ENST00000623112 922 ntBASIC21.72■■□□□ 1.07
NUP43Q8NFH3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUP43Q8NFH3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms