Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
RTL9Q8NET4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
RTL9Q8NET4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.06■■■□□ 2.24
RTL9Q8NET4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC29.06■■■□□ 2.24
RTL9Q8NET4 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.06■■■□□ 2.24
RTL9Q8NET4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.05■■■□□ 2.24
RTL9Q8NET4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
RTL9Q8NET4 CD72-202ENST00000378430 585 ntTSL 3 BASIC29.03■■■□□ 2.24
RTL9Q8NET4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
RTL9Q8NET4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
RTL9Q8NET4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
RTL9Q8NET4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
RTL9Q8NET4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
RTL9Q8NET4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC29.02■■■□□ 2.24
RTL9Q8NET4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
RTL9Q8NET4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.01■■■□□ 2.24
RTL9Q8NET4 AL136116.3-201ENST00000402907 1138 ntBASIC29.01■■■□□ 2.24
RTL9Q8NET4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.24
RTL9Q8NET4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
RTL9Q8NET4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
RTL9Q8NET4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29.01■■■□□ 2.23
RTL9Q8NET4 LBH-205ENST00000407930 756 ntTSL 2 BASIC29.01■■■□□ 2.23
RTL9Q8NET4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC29.01■■■□□ 2.23
RTL9Q8NET4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
RTL9Q8NET4 AL512631.2-201ENST00000604634 923 ntBASIC29.01■■■□□ 2.23
RTL9Q8NET4 MIR6722-201ENST00000617286 78 ntBASIC29.01■■■□□ 2.23
RTL9Q8NET4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC29.01■■■□□ 2.23
RTL9Q8NET4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
RTL9Q8NET4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC29■■■□□ 2.23
RTL9Q8NET4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
RTL9Q8NET4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29■■■□□ 2.23
RTL9Q8NET4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
RTL9Q8NET4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29■■■□□ 2.23
RTL9Q8NET4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
RTL9Q8NET4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
RTL9Q8NET4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC29■■■□□ 2.23
RTL9Q8NET4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29■■■□□ 2.23
RTL9Q8NET4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
RTL9Q8NET4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.99■■■□□ 2.23
RTL9Q8NET4 DUSP8P4-201ENST00000399538 1761 ntBASIC28.99■■■□□ 2.23
RTL9Q8NET4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
RTL9Q8NET4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
RTL9Q8NET4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
RTL9Q8NET4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
RTL9Q8NET4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.99■■■□□ 2.23
RTL9Q8NET4 AC110285.6-201ENST00000617652 491 ntBASIC28.99■■■□□ 2.23
RTL9Q8NET4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
RTL9Q8NET4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RTL9Q8NET4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC28.98■■■□□ 2.23
RTL9Q8NET4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
RTL9Q8NET4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC28.98■■■□□ 2.23
RTL9Q8NET4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
RTL9Q8NET4 AL356740.2-201ENST00000601559 647 ntBASIC28.98■■■□□ 2.23
RTL9Q8NET4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.97■■■□□ 2.23
RTL9Q8NET4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
RTL9Q8NET4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC28.97■■■□□ 2.23
RTL9Q8NET4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
RTL9Q8NET4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
RTL9Q8NET4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.96■■■□□ 2.23
RTL9Q8NET4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
RTL9Q8NET4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
RTL9Q8NET4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC28.95■■■□□ 2.22
RTL9Q8NET4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC28.95■■■□□ 2.22
RTL9Q8NET4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.95■■■□□ 2.22
RTL9Q8NET4 MIR4466-201ENST00000606121 54 ntBASIC28.95■■■□□ 2.22
RTL9Q8NET4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
RTL9Q8NET4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
RTL9Q8NET4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RTL9Q8NET4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC28.94■■■□□ 2.22
RTL9Q8NET4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.94■■■□□ 2.22
RTL9Q8NET4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.94■■■□□ 2.22
RTL9Q8NET4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC28.94■■■□□ 2.22
RTL9Q8NET4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
RTL9Q8NET4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RTL9Q8NET4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
RTL9Q8NET4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC28.93■■■□□ 2.22
RTL9Q8NET4 RASSF1-AS1-201ENST00000629828 790 ntBASIC28.93■■■□□ 2.22
RTL9Q8NET4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RTL9Q8NET4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RTL9Q8NET4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RTL9Q8NET4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.92■■■□□ 2.22
RTL9Q8NET4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC28.92■■■□□ 2.22
RTL9Q8NET4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RTL9Q8NET4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RTL9Q8NET4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RTL9Q8NET4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RTL9Q8NET4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
RTL9Q8NET4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC28.91■■■□□ 2.22
RTL9Q8NET4 MIR6089-201ENST00000616698 64 ntBASIC28.91■■■□□ 2.22
RTL9Q8NET4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
RTL9Q8NET4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RTL9Q8NET4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RTL9Q8NET4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RTL9Q8NET4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
RTL9Q8NET4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RTL9Q8NET4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RTL9Q8NET4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
RTL9Q8NET4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
RTL9Q8NET4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.89■■■□□ 2.22
RTL9Q8NET4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.89■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 271.3 ms