Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
CFAP43Q8NDM7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC37.11■■■■□ 3.53
CFAP43Q8NDM7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC37.11■■■■□ 3.53
CFAP43Q8NDM7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
CFAP43Q8NDM7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
CFAP43Q8NDM7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC37.11■■■■□ 3.53
CFAP43Q8NDM7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC37.1■■■■□ 3.53
CFAP43Q8NDM7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC37.1■■■■□ 3.53
CFAP43Q8NDM7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
CFAP43Q8NDM7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
CFAP43Q8NDM7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC37.09■■■■□ 3.53
CFAP43Q8NDM7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
CFAP43Q8NDM7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC37.09■■■■□ 3.53
CFAP43Q8NDM7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC37.09■■■■□ 3.53
CFAP43Q8NDM7 PBX2P1-201ENST00000493219 1291 ntBASIC37.08■■■■□ 3.53
CFAP43Q8NDM7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC37.08■■■■□ 3.53
CFAP43Q8NDM7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
CFAP43Q8NDM7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
CFAP43Q8NDM7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.53
CFAP43Q8NDM7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC37.07■■■■□ 3.53
CFAP43Q8NDM7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
CFAP43Q8NDM7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC37.07■■■■□ 3.52
CFAP43Q8NDM7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
CFAP43Q8NDM7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
CFAP43Q8NDM7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC37.06■■■■□ 3.52
CFAP43Q8NDM7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
CFAP43Q8NDM7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
CFAP43Q8NDM7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
CFAP43Q8NDM7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
CFAP43Q8NDM7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
CFAP43Q8NDM7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC37.04■■■■□ 3.52
CFAP43Q8NDM7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC37.04■■■■□ 3.52
CFAP43Q8NDM7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
CFAP43Q8NDM7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CFAP43Q8NDM7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CFAP43Q8NDM7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
CFAP43Q8NDM7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CFAP43Q8NDM7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC37.03■■■■□ 3.52
CFAP43Q8NDM7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CFAP43Q8NDM7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CFAP43Q8NDM7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CFAP43Q8NDM7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
CFAP43Q8NDM7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
CFAP43Q8NDM7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC37.02■■■■□ 3.52
CFAP43Q8NDM7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC37.02■■■■□ 3.52
CFAP43Q8NDM7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC37.02■■■■□ 3.52
CFAP43Q8NDM7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC37.01■■■■□ 3.52
CFAP43Q8NDM7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
CFAP43Q8NDM7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
CFAP43Q8NDM7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC37.01■■■■□ 3.52
CFAP43Q8NDM7 GAK-223ENST00000628912 497 ntTSL 5 BASIC37.01■■■■□ 3.52
CFAP43Q8NDM7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC37.01■■■■□ 3.51
CFAP43Q8NDM7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC37.01■■■■□ 3.51
CFAP43Q8NDM7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC37■■■■□ 3.51
CFAP43Q8NDM7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC37■■■■□ 3.51
CFAP43Q8NDM7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC36.99■■■■□ 3.51
CFAP43Q8NDM7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC36.99■■■■□ 3.51
CFAP43Q8NDM7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
CFAP43Q8NDM7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC36.99■■■■□ 3.51
CFAP43Q8NDM7 AC105265.2-201ENST00000467189 838 ntBASIC36.99■■■■□ 3.51
CFAP43Q8NDM7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC36.99■■■■□ 3.51
CFAP43Q8NDM7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC36.99■■■■□ 3.51
CFAP43Q8NDM7 AC092803.2-201ENST00000564287 1899 ntBASIC36.98■■■■□ 3.51
CFAP43Q8NDM7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CFAP43Q8NDM7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC36.98■■■■□ 3.51
CFAP43Q8NDM7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CFAP43Q8NDM7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC36.98■■■■□ 3.51
CFAP43Q8NDM7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CFAP43Q8NDM7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
CFAP43Q8NDM7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CFAP43Q8NDM7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC36.98■■■■□ 3.51
CFAP43Q8NDM7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC36.97■■■■□ 3.51
CFAP43Q8NDM7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
CFAP43Q8NDM7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC36.97■■■■□ 3.51
CFAP43Q8NDM7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC36.97■■■■□ 3.51
CFAP43Q8NDM7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC36.96■■■■□ 3.51
CFAP43Q8NDM7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC36.96■■■■□ 3.51
CFAP43Q8NDM7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
CFAP43Q8NDM7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
CFAP43Q8NDM7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
CFAP43Q8NDM7 EDA-201ENST00000338901 1233 ntBASIC36.96■■■■□ 3.51
CFAP43Q8NDM7 ANKRD20A6P-201ENST00000618763 204 ntBASIC36.96■■■■□ 3.51
CFAP43Q8NDM7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
CFAP43Q8NDM7 AL136162.1-201ENST00000607711 1078 ntBASIC36.95■■■■□ 3.51
CFAP43Q8NDM7 AF131216.4-201ENST00000638924 1588 ntBASIC36.95■■■■□ 3.51
CFAP43Q8NDM7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC36.95■■■■□ 3.51
CFAP43Q8NDM7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC36.95■■■■□ 3.5
CFAP43Q8NDM7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.5
CFAP43Q8NDM7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC36.94■■■■□ 3.5
CFAP43Q8NDM7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC36.94■■■■□ 3.5
CFAP43Q8NDM7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
CFAP43Q8NDM7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
CFAP43Q8NDM7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
CFAP43Q8NDM7 FOXO3B-201ENST00000395675 1928 ntBASIC36.93■■■■□ 3.5
CFAP43Q8NDM7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
CFAP43Q8NDM7 UNC93B3-201ENST00000308076 687 ntBASIC36.93■■■■□ 3.5
CFAP43Q8NDM7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC36.92■■■■□ 3.5
CFAP43Q8NDM7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC36.92■■■■□ 3.5
CFAP43Q8NDM7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC36.92■■■■□ 3.5
CFAP43Q8NDM7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC36.92■■■■□ 3.5
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms