Protein–RNA interactions for Protein: Q8NC42

RNF149, E3 ubiquitin-protein ligase RNF149, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149Q8NC42 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RNF149Q8NC42 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.73■■□□□ 1.71
RNF149Q8NC42 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.73■■□□□ 1.71
RNF149Q8NC42 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.73■■□□□ 1.71
RNF149Q8NC42 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
RNF149Q8NC42 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.73■■□□□ 1.71
RNF149Q8NC42 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.73■■□□□ 1.71
RNF149Q8NC42 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RNF149Q8NC42 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RNF149Q8NC42 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.72■■□□□ 1.71
RNF149Q8NC42 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
RNF149Q8NC42 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RNF149Q8NC42 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.71■■□□□ 1.71
RNF149Q8NC42 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF149Q8NC42 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RNF149Q8NC42 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.71■■□□□ 1.71
RNF149Q8NC42 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF149Q8NC42 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.71■■□□□ 1.71
RNF149Q8NC42 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
RNF149Q8NC42 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF149Q8NC42 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RNF149Q8NC42 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RNF149Q8NC42 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RNF149Q8NC42 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RNF149Q8NC42 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RNF149Q8NC42 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
RNF149Q8NC42 KRT16P3-201ENST00000439127 1283 ntBASIC25.7■■□□□ 1.7
RNF149Q8NC42 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RNF149Q8NC42 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.69■■□□□ 1.7
RNF149Q8NC42 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.69■■□□□ 1.7
RNF149Q8NC42 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.69■■□□□ 1.7
RNF149Q8NC42 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
RNF149Q8NC42 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF149Q8NC42 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.68■■□□□ 1.7
RNF149Q8NC42 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF149Q8NC42 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.68■■□□□ 1.7
RNF149Q8NC42 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF149Q8NC42 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF149Q8NC42 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF149Q8NC42 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF149Q8NC42 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.67■■□□□ 1.7
RNF149Q8NC42 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF149Q8NC42 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.67■■□□□ 1.7
RNF149Q8NC42 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF149Q8NC42 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.67■■□□□ 1.7
RNF149Q8NC42 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF149Q8NC42 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.67■■□□□ 1.7
RNF149Q8NC42 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF149Q8NC42 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF149Q8NC42 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF149Q8NC42 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.66■■□□□ 1.7
RNF149Q8NC42 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF149Q8NC42 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
RNF149Q8NC42 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RNF149Q8NC42 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
RNF149Q8NC42 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.66■■□□□ 1.7
RNF149Q8NC42 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF149Q8NC42 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.66■■□□□ 1.7
RNF149Q8NC42 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
RNF149Q8NC42 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
RNF149Q8NC42 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF149Q8NC42 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.65■■□□□ 1.7
RNF149Q8NC42 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF149Q8NC42 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.65■■□□□ 1.7
RNF149Q8NC42 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.65■■□□□ 1.7
RNF149Q8NC42 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.65■■□□□ 1.7
RNF149Q8NC42 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RNF149Q8NC42 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.65■■□□□ 1.7
RNF149Q8NC42 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
RNF149Q8NC42 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF149Q8NC42 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF149Q8NC42 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF149Q8NC42 MIR6089-201ENST00000616698 64 ntBASIC25.64■■□□□ 1.7
RNF149Q8NC42 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF149Q8NC42 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.69
RNF149Q8NC42 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
RNF149Q8NC42 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF149Q8NC42 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF149Q8NC42 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF149Q8NC42 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.63■■□□□ 1.69
RNF149Q8NC42 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF149Q8NC42 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF149Q8NC42 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.63■■□□□ 1.69
RNF149Q8NC42 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.63■■□□□ 1.69
RNF149Q8NC42 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.63■■□□□ 1.69
RNF149Q8NC42 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF149Q8NC42 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF149Q8NC42 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RNF149Q8NC42 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.63■■□□□ 1.69
RNF149Q8NC42 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RNF149Q8NC42 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
RNF149Q8NC42 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF149Q8NC42 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RNF149Q8NC42 AC010997.5-201ENST00000609182 354 ntBASIC25.62■■□□□ 1.69
RNF149Q8NC42 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF149Q8NC42 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF149Q8NC42 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RNF149Q8NC42 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RNF149Q8NC42 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF149Q8NC42 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms