Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.25■□□□□ 0.99
CLDN22Q8N7P3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN22Q8N7P3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN22Q8N7P3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CLDN22Q8N7P3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.24■□□□□ 0.99
CLDN22Q8N7P3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN22Q8N7P3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN22Q8N7P3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN22Q8N7P3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN22Q8N7P3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN22Q8N7P3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
CLDN22Q8N7P3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CLDN22Q8N7P3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.23■□□□□ 0.99
CLDN22Q8N7P3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN22Q8N7P3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CLDN22Q8N7P3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CLDN22Q8N7P3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 AC004812.2-201ENST00000611079 2094 ntBASIC21.22■□□□□ 0.99
CLDN22Q8N7P3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN22Q8N7P3 KRT18P10-201ENST00000388836 1287 ntBASIC21.21■□□□□ 0.99
CLDN22Q8N7P3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
CLDN22Q8N7P3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN22Q8N7P3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CLDN22Q8N7P3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN22Q8N7P3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN22Q8N7P3 AC026202.3-201ENST00000600805 1127 ntBASIC21.2■□□□□ 0.98
CLDN22Q8N7P3 RAP2CP1-202ENST00000605179 643 ntBASIC21.2■□□□□ 0.98
CLDN22Q8N7P3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN22Q8N7P3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.19■□□□□ 0.98
CLDN22Q8N7P3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN22Q8N7P3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN22Q8N7P3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.19■□□□□ 0.98
CLDN22Q8N7P3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN22Q8N7P3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN22Q8N7P3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN22Q8N7P3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN22Q8N7P3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.18■□□□□ 0.98
CLDN22Q8N7P3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN22Q8N7P3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.18■□□□□ 0.98
CLDN22Q8N7P3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.18■□□□□ 0.98
CLDN22Q8N7P3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN22Q8N7P3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN22Q8N7P3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN22Q8N7P3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN22Q8N7P3 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.17■□□□□ 0.98
CLDN22Q8N7P3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN22Q8N7P3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN22Q8N7P3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN22Q8N7P3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN22Q8N7P3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CLDN22Q8N7P3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CLDN22Q8N7P3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CLDN22Q8N7P3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CLDN22Q8N7P3 HLA-L-211ENST00000482052 1765 ntBASIC21.16■□□□□ 0.98
CLDN22Q8N7P3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN22Q8N7P3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN22Q8N7P3 AC009831.1-201ENST00000580420 1582 ntBASIC21.16■□□□□ 0.98
CLDN22Q8N7P3 RNF126P1-201ENST00000567452 1320 ntBASIC21.16■□□□□ 0.98
CLDN22Q8N7P3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN22Q8N7P3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CLDN22Q8N7P3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CLDN22Q8N7P3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN22Q8N7P3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CLDN22Q8N7P3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN22Q8N7P3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN22Q8N7P3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.15■□□□□ 0.98
CLDN22Q8N7P3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CLDN22Q8N7P3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CLDN22Q8N7P3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN22Q8N7P3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN22Q8N7P3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLDN22Q8N7P3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLDN22Q8N7P3 FOXO3B-201ENST00000395675 1928 ntBASIC21.14■□□□□ 0.98
CLDN22Q8N7P3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CLDN22Q8N7P3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN22Q8N7P3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.14■□□□□ 0.97
CLDN22Q8N7P3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN22Q8N7P3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN22Q8N7P3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN22Q8N7P3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN22Q8N7P3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.14■□□□□ 0.97
CLDN22Q8N7P3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN22Q8N7P3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN22Q8N7P3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN22Q8N7P3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN22Q8N7P3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.13■□□□□ 0.97
CLDN22Q8N7P3 DUSP8P5-201ENST00000422884 1815 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms