Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 SLC6A10P-202ENST00000431994 2058 ntBASIC24.7■■□□□ 1.54
TTC9BQ8N6N2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
TTC9BQ8N6N2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
TTC9BQ8N6N2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.69■■□□□ 1.54
TTC9BQ8N6N2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
TTC9BQ8N6N2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC9BQ8N6N2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC9BQ8N6N2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.68■■□□□ 1.54
TTC9BQ8N6N2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC9BQ8N6N2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.68■■□□□ 1.54
TTC9BQ8N6N2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.68■■□□□ 1.54
TTC9BQ8N6N2 AC008406.3-201ENST00000620001 1374 ntBASIC24.67■■□□□ 1.54
TTC9BQ8N6N2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
TTC9BQ8N6N2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TTC9BQ8N6N2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
TTC9BQ8N6N2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.67■■□□□ 1.54
TTC9BQ8N6N2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.67■■□□□ 1.54
TTC9BQ8N6N2 AC145676.1-201ENST00000514988 2004 ntBASIC24.67■■□□□ 1.54
TTC9BQ8N6N2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TTC9BQ8N6N2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TTC9BQ8N6N2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TTC9BQ8N6N2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC9BQ8N6N2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.66■■□□□ 1.54
TTC9BQ8N6N2 AL117332.1-201ENST00000622628 974 ntBASIC24.66■■□□□ 1.54
TTC9BQ8N6N2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.66■■□□□ 1.54
TTC9BQ8N6N2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
TTC9BQ8N6N2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TTC9BQ8N6N2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
TTC9BQ8N6N2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.65■■□□□ 1.54
TTC9BQ8N6N2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TTC9BQ8N6N2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TTC9BQ8N6N2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.65■■□□□ 1.54
TTC9BQ8N6N2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TTC9BQ8N6N2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.64■■□□□ 1.54
TTC9BQ8N6N2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TTC9BQ8N6N2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TTC9BQ8N6N2 AC131281.2-201ENST00000520478 145 ntBASIC24.64■■□□□ 1.54
TTC9BQ8N6N2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
TTC9BQ8N6N2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 MIR6724-1-201ENST00000616420 92 ntBASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 MIR6724-2-201ENST00000616483 92 ntBASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 MIR6724-4-201ENST00000617390 92 ntBASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 MIR6724-3-201ENST00000622482 92 ntBASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.63■■□□□ 1.53
TTC9BQ8N6N2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TTC9BQ8N6N2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.62■■□□□ 1.53
TTC9BQ8N6N2 SNX5-217ENST00000606557 1087 ntBASIC24.62■■□□□ 1.53
TTC9BQ8N6N2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.62■■□□□ 1.53
TTC9BQ8N6N2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.62■■□□□ 1.53
TTC9BQ8N6N2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TTC9BQ8N6N2 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.61■■□□□ 1.53
TTC9BQ8N6N2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TTC9BQ8N6N2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.61■■□□□ 1.53
TTC9BQ8N6N2 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.61■■□□□ 1.53
TTC9BQ8N6N2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.61■■□□□ 1.53
TTC9BQ8N6N2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
TTC9BQ8N6N2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
TTC9BQ8N6N2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.6■■□□□ 1.53
TTC9BQ8N6N2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.6■■□□□ 1.53
TTC9BQ8N6N2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.6■■□□□ 1.53
TTC9BQ8N6N2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TTC9BQ8N6N2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.59■■□□□ 1.53
TTC9BQ8N6N2 MIR3621-201ENST00000580529 85 ntBASIC24.59■■□□□ 1.53
TTC9BQ8N6N2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.59■■□□□ 1.53
TTC9BQ8N6N2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.59■■□□□ 1.53
TTC9BQ8N6N2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.59■■□□□ 1.53
TTC9BQ8N6N2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
TTC9BQ8N6N2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
TTC9BQ8N6N2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TTC9BQ8N6N2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TTC9BQ8N6N2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TTC9BQ8N6N2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.58■■□□□ 1.53
TTC9BQ8N6N2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
TTC9BQ8N6N2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.58■■□□□ 1.52
TTC9BQ8N6N2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
TTC9BQ8N6N2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.58■■□□□ 1.52
TTC9BQ8N6N2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
TTC9BQ8N6N2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC9BQ8N6N2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.57■■□□□ 1.52
TTC9BQ8N6N2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC9BQ8N6N2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.57■■□□□ 1.52
TTC9BQ8N6N2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC9BQ8N6N2 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.57■■□□□ 1.52
TTC9BQ8N6N2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.57■■□□□ 1.52
TTC9BQ8N6N2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC9BQ8N6N2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC9BQ8N6N2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC9BQ8N6N2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.56■■□□□ 1.52
TTC9BQ8N6N2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
TTC9BQ8N6N2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TTC9BQ8N6N2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TTC9BQ8N6N2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms