Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SIX5Q8N196 AP001330.3-201ENST00000520123 633 ntBASIC24.01■■□□□ 1.43
SIX5Q8N196 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SIX5Q8N196 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.01■■□□□ 1.43
SIX5Q8N196 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
SIX5Q8N196 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SIX5Q8N196 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SIX5Q8N196 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24■■□□□ 1.43
SIX5Q8N196 AL162430.1-201ENST00000480705 870 ntBASIC24■■□□□ 1.43
SIX5Q8N196 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24■■□□□ 1.43
SIX5Q8N196 AC087623.3-201ENST00000607047 1098 ntBASIC24■■□□□ 1.43
SIX5Q8N196 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24■■□□□ 1.43
SIX5Q8N196 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24■■□□□ 1.43
SIX5Q8N196 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
SIX5Q8N196 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24■■□□□ 1.43
SIX5Q8N196 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.99■■□□□ 1.43
SIX5Q8N196 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.99■■□□□ 1.43
SIX5Q8N196 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SIX5Q8N196 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SIX5Q8N196 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SIX5Q8N196 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SIX5Q8N196 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SIX5Q8N196 FOXO3B-201ENST00000395675 1928 ntBASIC23.98■■□□□ 1.43
SIX5Q8N196 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SIX5Q8N196 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SIX5Q8N196 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SIX5Q8N196 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SIX5Q8N196 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SIX5Q8N196 AC091305.1-201ENST00000479476 895 ntBASIC23.97■■□□□ 1.43
SIX5Q8N196 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SIX5Q8N196 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SIX5Q8N196 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SIX5Q8N196 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SIX5Q8N196 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.96■■□□□ 1.43
SIX5Q8N196 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SIX5Q8N196 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SIX5Q8N196 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SIX5Q8N196 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SIX5Q8N196 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SIX5Q8N196 AC004448.1-201ENST00000458332 883 ntBASIC23.96■■□□□ 1.43
SIX5Q8N196 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.96■■□□□ 1.43
SIX5Q8N196 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
SIX5Q8N196 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SIX5Q8N196 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SIX5Q8N196 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SIX5Q8N196 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SIX5Q8N196 DUX4L19-201ENST00000557448 1267 ntBASIC23.95■■□□□ 1.42
SIX5Q8N196 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SIX5Q8N196 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SIX5Q8N196 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.94■■□□□ 1.42
SIX5Q8N196 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SIX5Q8N196 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SIX5Q8N196 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SIX5Q8N196 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SIX5Q8N196 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.93■■□□□ 1.42
SIX5Q8N196 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.93■■□□□ 1.42
SIX5Q8N196 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.93■■□□□ 1.42
SIX5Q8N196 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SIX5Q8N196 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
SIX5Q8N196 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
SIX5Q8N196 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SIX5Q8N196 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SIX5Q8N196 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SIX5Q8N196 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SIX5Q8N196 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SIX5Q8N196 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SIX5Q8N196 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.92■■□□□ 1.42
SIX5Q8N196 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.92■■□□□ 1.42
SIX5Q8N196 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.92■■□□□ 1.42
SIX5Q8N196 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
SIX5Q8N196 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.91■■□□□ 1.42
SIX5Q8N196 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.91■■□□□ 1.42
SIX5Q8N196 AC090877.2-201ENST00000558441 1738 ntBASIC23.9■■□□□ 1.42
SIX5Q8N196 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.9■■□□□ 1.42
SIX5Q8N196 MIR4767-201ENST00000582827 78 ntBASIC23.9■■□□□ 1.42
SIX5Q8N196 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.9■■□□□ 1.42
SIX5Q8N196 SYT6-210ENST00000641643 1587 ntBASIC23.9■■□□□ 1.42
SIX5Q8N196 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SIX5Q8N196 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SIX5Q8N196 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.89■■□□□ 1.42
SIX5Q8N196 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.89■■□□□ 1.41
SIX5Q8N196 CA15P2-201ENST00000611168 834 ntBASIC23.89■■□□□ 1.41
SIX5Q8N196 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SIX5Q8N196 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
SIX5Q8N196 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.89■■□□□ 1.41
SIX5Q8N196 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.89■■□□□ 1.41
SIX5Q8N196 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SIX5Q8N196 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SIX5Q8N196 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SIX5Q8N196 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SIX5Q8N196 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SIX5Q8N196 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SIX5Q8N196 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.88■■□□□ 1.41
SIX5Q8N196 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SIX5Q8N196 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SIX5Q8N196 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SIX5Q8N196 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SIX5Q8N196 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.87■■□□□ 1.41
SIX5Q8N196 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
SIX5Q8N196 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms