Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.04■■□□□ 1.28
CPNE9Q8IYJ1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.04■■□□□ 1.28
CPNE9Q8IYJ1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPNE9Q8IYJ1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPNE9Q8IYJ1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPNE9Q8IYJ1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.04■■□□□ 1.28
CPNE9Q8IYJ1 LONRF2P2-201ENST00000439212 571 ntBASIC23.04■■□□□ 1.28
CPNE9Q8IYJ1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CPNE9Q8IYJ1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.04■■□□□ 1.28
CPNE9Q8IYJ1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPNE9Q8IYJ1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CPNE9Q8IYJ1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPNE9Q8IYJ1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.03■■□□□ 1.28
CPNE9Q8IYJ1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPNE9Q8IYJ1 ATP5G2P3-201ENST00000429083 425 ntBASIC23.03■■□□□ 1.28
CPNE9Q8IYJ1 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.03■■□□□ 1.28
CPNE9Q8IYJ1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.03■■□□□ 1.28
CPNE9Q8IYJ1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.03■■□□□ 1.28
CPNE9Q8IYJ1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CPNE9Q8IYJ1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPNE9Q8IYJ1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CPNE9Q8IYJ1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.03■■□□□ 1.28
CPNE9Q8IYJ1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
CPNE9Q8IYJ1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPNE9Q8IYJ1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CPNE9Q8IYJ1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPNE9Q8IYJ1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPNE9Q8IYJ1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.02■■□□□ 1.28
CPNE9Q8IYJ1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CPNE9Q8IYJ1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
CPNE9Q8IYJ1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.01■■□□□ 1.27
CPNE9Q8IYJ1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.01■■□□□ 1.27
CPNE9Q8IYJ1 AC139795.1-202ENST00000500444 432 ntBASIC23.01■■□□□ 1.27
CPNE9Q8IYJ1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CPNE9Q8IYJ1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CPNE9Q8IYJ1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CPNE9Q8IYJ1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.01■■□□□ 1.27
CPNE9Q8IYJ1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CPNE9Q8IYJ1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.01■■□□□ 1.27
CPNE9Q8IYJ1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23■■□□□ 1.27
CPNE9Q8IYJ1 HLA-L-211ENST00000482052 1765 ntBASIC23■■□□□ 1.27
CPNE9Q8IYJ1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23■■□□□ 1.27
CPNE9Q8IYJ1 AL592295.1-201ENST00000400984 884 ntBASIC23■■□□□ 1.27
CPNE9Q8IYJ1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CPNE9Q8IYJ1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CPNE9Q8IYJ1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23■■□□□ 1.27
CPNE9Q8IYJ1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23■■□□□ 1.27
CPNE9Q8IYJ1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23■■□□□ 1.27
CPNE9Q8IYJ1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPNE9Q8IYJ1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CPNE9Q8IYJ1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPNE9Q8IYJ1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CPNE9Q8IYJ1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CPNE9Q8IYJ1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CPNE9Q8IYJ1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPNE9Q8IYJ1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPNE9Q8IYJ1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPNE9Q8IYJ1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CPNE9Q8IYJ1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.98■■□□□ 1.27
CPNE9Q8IYJ1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CPNE9Q8IYJ1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CPNE9Q8IYJ1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CPNE9Q8IYJ1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CPNE9Q8IYJ1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CPNE9Q8IYJ1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CPNE9Q8IYJ1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPNE9Q8IYJ1 LINC00543-201ENST00000567234 1845 ntBASIC22.97■■□□□ 1.27
CPNE9Q8IYJ1 TSPY13P-201ENST00000338964 914 ntBASIC22.97■■□□□ 1.27
CPNE9Q8IYJ1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPNE9Q8IYJ1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPNE9Q8IYJ1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
CPNE9Q8IYJ1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPNE9Q8IYJ1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
CPNE9Q8IYJ1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.96■■□□□ 1.27
CPNE9Q8IYJ1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CPNE9Q8IYJ1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPNE9Q8IYJ1 BHLHE23-202ENST00000612929 1109 ntBASIC22.96■■□□□ 1.27
CPNE9Q8IYJ1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPNE9Q8IYJ1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
CPNE9Q8IYJ1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.96■■□□□ 1.27
CPNE9Q8IYJ1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPNE9Q8IYJ1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPNE9Q8IYJ1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPNE9Q8IYJ1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPNE9Q8IYJ1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.95■■□□□ 1.26
CPNE9Q8IYJ1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CPNE9Q8IYJ1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.95■■□□□ 1.26
CPNE9Q8IYJ1 AC012354.3-201ENST00000623734 483 ntBASIC22.95■■□□□ 1.26
CPNE9Q8IYJ1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CPNE9Q8IYJ1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPNE9Q8IYJ1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
CPNE9Q8IYJ1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPNE9Q8IYJ1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.94■■□□□ 1.26
CPNE9Q8IYJ1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPNE9Q8IYJ1 AC090877.2-201ENST00000558441 1738 ntBASIC22.94■■□□□ 1.26
CPNE9Q8IYJ1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
CPNE9Q8IYJ1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CPNE9Q8IYJ1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CPNE9Q8IYJ1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
CPNE9Q8IYJ1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms