Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SFTPA1Q8IWL2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
SFTPA1Q8IWL2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SFTPA1Q8IWL2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SFTPA1Q8IWL2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
SFTPA1Q8IWL2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
SFTPA1Q8IWL2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.88■■□□□ 1.41
SFTPA1Q8IWL2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.88■■□□□ 1.41
SFTPA1Q8IWL2 AL139246.5-201ENST00000606645 996 ntBASIC23.88■■□□□ 1.41
SFTPA1Q8IWL2 AC110285.6-201ENST00000617652 491 ntBASIC23.88■■□□□ 1.41
SFTPA1Q8IWL2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SFTPA1Q8IWL2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SFTPA1Q8IWL2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SFTPA1Q8IWL2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.87■■□□□ 1.41
SFTPA1Q8IWL2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SFTPA1Q8IWL2 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.87■■□□□ 1.41
SFTPA1Q8IWL2 AL356740.2-201ENST00000601559 647 ntBASIC23.87■■□□□ 1.41
SFTPA1Q8IWL2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SFTPA1Q8IWL2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SFTPA1Q8IWL2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SFTPA1Q8IWL2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SFTPA1Q8IWL2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SFTPA1Q8IWL2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SFTPA1Q8IWL2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SFTPA1Q8IWL2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.86■■□□□ 1.41
SFTPA1Q8IWL2 SNX5-217ENST00000606557 1087 ntBASIC23.86■■□□□ 1.41
SFTPA1Q8IWL2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
SFTPA1Q8IWL2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SFTPA1Q8IWL2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SFTPA1Q8IWL2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
SFTPA1Q8IWL2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SFTPA1Q8IWL2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SFTPA1Q8IWL2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SFTPA1Q8IWL2 AC092803.2-201ENST00000564287 1899 ntBASIC23.83■■□□□ 1.41
SFTPA1Q8IWL2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SFTPA1Q8IWL2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SFTPA1Q8IWL2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.83■■□□□ 1.41
SFTPA1Q8IWL2 AC096631.2-201ENST00000436136 790 ntBASIC23.83■■□□□ 1.41
SFTPA1Q8IWL2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SFTPA1Q8IWL2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SFTPA1Q8IWL2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.83■■□□□ 1.4
SFTPA1Q8IWL2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SFTPA1Q8IWL2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SFTPA1Q8IWL2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.82■■□□□ 1.4
SFTPA1Q8IWL2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.82■■□□□ 1.4
SFTPA1Q8IWL2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.82■■□□□ 1.4
SFTPA1Q8IWL2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SFTPA1Q8IWL2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SFTPA1Q8IWL2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.81■■□□□ 1.4
SFTPA1Q8IWL2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SFTPA1Q8IWL2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SFTPA1Q8IWL2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.81■■□□□ 1.4
SFTPA1Q8IWL2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.81■■□□□ 1.4
SFTPA1Q8IWL2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SFTPA1Q8IWL2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SFTPA1Q8IWL2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SFTPA1Q8IWL2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SFTPA1Q8IWL2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SFTPA1Q8IWL2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.8■■□□□ 1.4
SFTPA1Q8IWL2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.8■■□□□ 1.4
SFTPA1Q8IWL2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SFTPA1Q8IWL2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
SFTPA1Q8IWL2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SFTPA1Q8IWL2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SFTPA1Q8IWL2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SFTPA1Q8IWL2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.79■■□□□ 1.4
SFTPA1Q8IWL2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SFTPA1Q8IWL2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.79■■□□□ 1.4
SFTPA1Q8IWL2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.79■■□□□ 1.4
SFTPA1Q8IWL2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SFTPA1Q8IWL2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.79■■□□□ 1.4
SFTPA1Q8IWL2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.79■■□□□ 1.4
SFTPA1Q8IWL2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
SFTPA1Q8IWL2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SFTPA1Q8IWL2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SFTPA1Q8IWL2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SFTPA1Q8IWL2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.77■■□□□ 1.4
SFTPA1Q8IWL2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SFTPA1Q8IWL2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.76■■□□□ 1.39
SFTPA1Q8IWL2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.76■■□□□ 1.39
SFTPA1Q8IWL2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.76■■□□□ 1.39
SFTPA1Q8IWL2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SFTPA1Q8IWL2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SFTPA1Q8IWL2 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.75■■□□□ 1.39
SFTPA1Q8IWL2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.75■■□□□ 1.39
SFTPA1Q8IWL2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.75■■□□□ 1.39
SFTPA1Q8IWL2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.75■■□□□ 1.39
SFTPA1Q8IWL2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SFTPA1Q8IWL2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.74■■□□□ 1.39
SFTPA1Q8IWL2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SFTPA1Q8IWL2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SFTPA1Q8IWL2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SFTPA1Q8IWL2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SFTPA1Q8IWL2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SFTPA1Q8IWL2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.73■■□□□ 1.39
SFTPA1Q8IWL2 MIR6722-201ENST00000617286 78 ntBASIC23.73■■□□□ 1.39
SFTPA1Q8IWL2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SFTPA1Q8IWL2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SFTPA1Q8IWL2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SFTPA1Q8IWL2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms