Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC36.26■■■■□ 3.4
ABCA9Q8IUA7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC36.26■■■■□ 3.39
ABCA9Q8IUA7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC36.25■■■■□ 3.39
ABCA9Q8IUA7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC36.25■■■■□ 3.39
ABCA9Q8IUA7 LBH-205ENST00000407930 756 ntTSL 2 BASIC36.25■■■■□ 3.39
ABCA9Q8IUA7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
ABCA9Q8IUA7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC36.24■■■■□ 3.39
ABCA9Q8IUA7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC36.24■■■■□ 3.39
ABCA9Q8IUA7 AC090877.2-201ENST00000558441 1738 ntBASIC36.24■■■■□ 3.39
ABCA9Q8IUA7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC36.24■■■■□ 3.39
ABCA9Q8IUA7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC36.23■■■■□ 3.39
ABCA9Q8IUA7 AC027682.1-201ENST00000562846 899 ntBASIC36.23■■■■□ 3.39
ABCA9Q8IUA7 RASA4CP-201ENST00000424092 1398 ntBASIC36.23■■■■□ 3.39
ABCA9Q8IUA7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC36.23■■■■□ 3.39
ABCA9Q8IUA7 MAG-206ENST00000597035 542 ntTSL 4 BASIC36.23■■■■□ 3.39
ABCA9Q8IUA7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
ABCA9Q8IUA7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
ABCA9Q8IUA7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
ABCA9Q8IUA7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC36.22■■■■□ 3.39
ABCA9Q8IUA7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC36.22■■■■□ 3.39
ABCA9Q8IUA7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
ABCA9Q8IUA7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC36.21■■■■□ 3.39
ABCA9Q8IUA7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC36.21■■■■□ 3.39
ABCA9Q8IUA7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
ABCA9Q8IUA7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC36.2■■■■□ 3.39
ABCA9Q8IUA7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
ABCA9Q8IUA7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
ABCA9Q8IUA7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC36.2■■■■□ 3.39
ABCA9Q8IUA7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC36.2■■■■□ 3.38
ABCA9Q8IUA7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
ABCA9Q8IUA7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC36.19■■■■□ 3.38
ABCA9Q8IUA7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
ABCA9Q8IUA7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC36.18■■■■□ 3.38
ABCA9Q8IUA7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
ABCA9Q8IUA7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
ABCA9Q8IUA7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
ABCA9Q8IUA7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
ABCA9Q8IUA7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
ABCA9Q8IUA7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC36.18■■■■□ 3.38
ABCA9Q8IUA7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC36.17■■■■□ 3.38
ABCA9Q8IUA7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
ABCA9Q8IUA7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
ABCA9Q8IUA7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
ABCA9Q8IUA7 AC090192.1-201ENST00000517740 490 ntBASIC36.16■■■■□ 3.38
ABCA9Q8IUA7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
ABCA9Q8IUA7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC36.16■■■■□ 3.38
ABCA9Q8IUA7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC36.16■■■■□ 3.38
ABCA9Q8IUA7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC36.15■■■■□ 3.38
ABCA9Q8IUA7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC36.15■■■■□ 3.38
ABCA9Q8IUA7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
ABCA9Q8IUA7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC36.14■■■■□ 3.38
ABCA9Q8IUA7 PTCHD3P2-201ENST00000424937 1205 ntBASIC36.14■■■■□ 3.38
ABCA9Q8IUA7 AC004448.1-201ENST00000458332 883 ntBASIC36.14■■■■□ 3.38
ABCA9Q8IUA7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC36.14■■■■□ 3.38
ABCA9Q8IUA7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC36.14■■■■□ 3.38
ABCA9Q8IUA7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC36.14■■■■□ 3.38
ABCA9Q8IUA7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
ABCA9Q8IUA7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
ABCA9Q8IUA7 SERBP1P1-201ENST00000396021 1160 ntBASIC36.13■■■■□ 3.37
ABCA9Q8IUA7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
ABCA9Q8IUA7 AC011298.3-201ENST00000615796 283 ntBASIC36.13■■■■□ 3.37
ABCA9Q8IUA7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC36.13■■■■□ 3.37
ABCA9Q8IUA7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC36.13■■■■□ 3.37
ABCA9Q8IUA7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC36.13■■■■□ 3.37
ABCA9Q8IUA7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC36.12■■■■□ 3.37
ABCA9Q8IUA7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC36.12■■■■□ 3.37
ABCA9Q8IUA7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC36.12■■■■□ 3.37
ABCA9Q8IUA7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC36.12■■■■□ 3.37
ABCA9Q8IUA7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC36.12■■■■□ 3.37
ABCA9Q8IUA7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC36.11■■■■□ 3.37
ABCA9Q8IUA7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC36.11■■■■□ 3.37
ABCA9Q8IUA7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC36.11■■■■□ 3.37
ABCA9Q8IUA7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC36.1■■■■□ 3.37
ABCA9Q8IUA7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC36.1■■■■□ 3.37
ABCA9Q8IUA7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
ABCA9Q8IUA7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC36.1■■■■□ 3.37
ABCA9Q8IUA7 RARRES2P11-201ENST00000635158 484 ntBASIC36.1■■■■□ 3.37
ABCA9Q8IUA7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC36.1■■■■□ 3.37
ABCA9Q8IUA7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC36.1■■■■□ 3.37
ABCA9Q8IUA7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
ABCA9Q8IUA7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
ABCA9Q8IUA7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC36.09■■■■□ 3.37
ABCA9Q8IUA7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
ABCA9Q8IUA7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC36.08■■■■□ 3.37
ABCA9Q8IUA7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC36.08■■■■□ 3.37
ABCA9Q8IUA7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC36.08■■■■□ 3.37
ABCA9Q8IUA7 SYT6-210ENST00000641643 1587 ntBASIC36.08■■■■□ 3.37
ABCA9Q8IUA7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
ABCA9Q8IUA7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC36.08■■■■□ 3.37
ABCA9Q8IUA7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC36.08■■■■□ 3.37
ABCA9Q8IUA7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC36.08■■■■□ 3.37
ABCA9Q8IUA7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC36.07■■■■□ 3.37
ABCA9Q8IUA7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC36.07■■■■□ 3.36
ABCA9Q8IUA7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC36.06■■■■□ 3.36
ABCA9Q8IUA7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC36.06■■■■□ 3.36
ABCA9Q8IUA7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC36.06■■■■□ 3.36
ABCA9Q8IUA7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC36.06■■■■□ 3.36
ABCA9Q8IUA7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
ABCA9Q8IUA7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC36.06■■■■□ 3.36
ABCA9Q8IUA7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC36.05■■■■□ 3.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms