Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.18■■□□□ 1.78
TRIM50Q86XT4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM50Q86XT4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.17■■□□□ 1.78
TRIM50Q86XT4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM50Q86XT4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.17■■□□□ 1.78
TRIM50Q86XT4 AC131281.2-201ENST00000520478 145 ntBASIC26.17■■□□□ 1.78
TRIM50Q86XT4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.17■■□□□ 1.78
TRIM50Q86XT4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM50Q86XT4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM50Q86XT4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.16■■□□□ 1.78
TRIM50Q86XT4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM50Q86XT4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM50Q86XT4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.15■■□□□ 1.78
TRIM50Q86XT4 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.15■■□□□ 1.78
TRIM50Q86XT4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM50Q86XT4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM50Q86XT4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM50Q86XT4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM50Q86XT4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM50Q86XT4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.14■■□□□ 1.78
TRIM50Q86XT4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM50Q86XT4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.14■■□□□ 1.78
TRIM50Q86XT4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.14■■□□□ 1.78
TRIM50Q86XT4 MIR6724-1-201ENST00000616420 92 ntBASIC26.14■■□□□ 1.78
TRIM50Q86XT4 MIR6724-2-201ENST00000616483 92 ntBASIC26.14■■□□□ 1.78
TRIM50Q86XT4 MIR6724-4-201ENST00000617390 92 ntBASIC26.14■■□□□ 1.78
TRIM50Q86XT4 MIR6724-3-201ENST00000622482 92 ntBASIC26.14■■□□□ 1.78
TRIM50Q86XT4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.14■■□□□ 1.78
TRIM50Q86XT4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.13■■□□□ 1.77
TRIM50Q86XT4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.13■■□□□ 1.77
TRIM50Q86XT4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM50Q86XT4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRIM50Q86XT4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
TRIM50Q86XT4 AC019069.1-201ENST00000610008 1333 ntBASIC26.13■■□□□ 1.77
TRIM50Q86XT4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM50Q86XT4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.12■■□□□ 1.77
TRIM50Q86XT4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM50Q86XT4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.12■■□□□ 1.77
TRIM50Q86XT4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.12■■□□□ 1.77
TRIM50Q86XT4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.12■■□□□ 1.77
TRIM50Q86XT4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM50Q86XT4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.12■■□□□ 1.77
TRIM50Q86XT4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRIM50Q86XT4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
TRIM50Q86XT4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM50Q86XT4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM50Q86XT4 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.11■■□□□ 1.77
TRIM50Q86XT4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.11■■□□□ 1.77
TRIM50Q86XT4 MIR3621-201ENST00000580529 85 ntBASIC26.11■■□□□ 1.77
TRIM50Q86XT4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.11■■□□□ 1.77
TRIM50Q86XT4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
TRIM50Q86XT4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRIM50Q86XT4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
TRIM50Q86XT4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRIM50Q86XT4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.1■■□□□ 1.77
TRIM50Q86XT4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.1■■□□□ 1.77
TRIM50Q86XT4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
TRIM50Q86XT4 SNX5-217ENST00000606557 1087 ntBASIC26.09■■□□□ 1.77
TRIM50Q86XT4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.09■■□□□ 1.77
TRIM50Q86XT4 AC091060.1-201ENST00000623524 1766 ntBASIC26.09■■□□□ 1.77
TRIM50Q86XT4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
TRIM50Q86XT4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRIM50Q86XT4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRIM50Q86XT4 DUSP8P4-201ENST00000399538 1761 ntBASIC26.08■■□□□ 1.77
TRIM50Q86XT4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.08■■□□□ 1.77
TRIM50Q86XT4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.08■■□□□ 1.77
TRIM50Q86XT4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.76
TRIM50Q86XT4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
TRIM50Q86XT4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.07■■□□□ 1.76
TRIM50Q86XT4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.07■■□□□ 1.76
TRIM50Q86XT4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.07■■□□□ 1.76
TRIM50Q86XT4 SLC6A10P-202ENST00000431994 2058 ntBASIC26.07■■□□□ 1.76
TRIM50Q86XT4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
TRIM50Q86XT4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRIM50Q86XT4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.06■■□□□ 1.76
TRIM50Q86XT4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
TRIM50Q86XT4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
TRIM50Q86XT4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRIM50Q86XT4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TRIM50Q86XT4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TRIM50Q86XT4 AL136116.3-201ENST00000402907 1138 ntBASIC26.05■■□□□ 1.76
TRIM50Q86XT4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
TRIM50Q86XT4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRIM50Q86XT4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.05■■□□□ 1.76
TRIM50Q86XT4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.05■■□□□ 1.76
TRIM50Q86XT4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
TRIM50Q86XT4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRIM50Q86XT4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.04■■□□□ 1.76
TRIM50Q86XT4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TRIM50Q86XT4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TRIM50Q86XT4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRIM50Q86XT4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TRIM50Q86XT4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TRIM50Q86XT4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TRIM50Q86XT4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TRIM50Q86XT4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.03■■□□□ 1.76
TRIM50Q86XT4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.03■■□□□ 1.76
TRIM50Q86XT4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.03■■□□□ 1.76
TRIM50Q86XT4 MIR4466-201ENST00000606121 54 ntBASIC26.03■■□□□ 1.76
TRIM50Q86XT4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms