Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
DDX53Q86TM3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX53Q86TM3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
DDX53Q86TM3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX53Q86TM3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
DDX53Q86TM3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.99■■□□□ 1.59
DDX53Q86TM3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX53Q86TM3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
DDX53Q86TM3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
DDX53Q86TM3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX53Q86TM3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX53Q86TM3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX53Q86TM3 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.97■■□□□ 1.59
DDX53Q86TM3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.97■■□□□ 1.59
DDX53Q86TM3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.97■■□□□ 1.59
DDX53Q86TM3 ERN1-208ENST00000606895 2068 ntBASIC24.97■■□□□ 1.59
DDX53Q86TM3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
DDX53Q86TM3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
DDX53Q86TM3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.96■■□□□ 1.59
DDX53Q86TM3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
DDX53Q86TM3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.96■■□□□ 1.59
DDX53Q86TM3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DDX53Q86TM3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DDX53Q86TM3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX53Q86TM3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DDX53Q86TM3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX53Q86TM3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.94■■□□□ 1.58
DDX53Q86TM3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX53Q86TM3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
DDX53Q86TM3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.94■■□□□ 1.58
DDX53Q86TM3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
DDX53Q86TM3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
DDX53Q86TM3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
DDX53Q86TM3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.93■■□□□ 1.58
DDX53Q86TM3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
DDX53Q86TM3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.93■■□□□ 1.58
DDX53Q86TM3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.93■■□□□ 1.58
DDX53Q86TM3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.93■■□□□ 1.58
DDX53Q86TM3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX53Q86TM3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DDX53Q86TM3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
DDX53Q86TM3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX53Q86TM3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX53Q86TM3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX53Q86TM3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.92■■□□□ 1.58
DDX53Q86TM3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.92■■□□□ 1.58
DDX53Q86TM3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
DDX53Q86TM3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
DDX53Q86TM3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX53Q86TM3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DDX53Q86TM3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DDX53Q86TM3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
DDX53Q86TM3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.91■■□□□ 1.58
DDX53Q86TM3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
DDX53Q86TM3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.9■■□□□ 1.58
DDX53Q86TM3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DDX53Q86TM3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.9■■□□□ 1.58
DDX53Q86TM3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
DDX53Q86TM3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.89■■□□□ 1.58
DDX53Q86TM3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.89■■□□□ 1.58
DDX53Q86TM3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.89■■□□□ 1.58
DDX53Q86TM3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.89■■□□□ 1.58
DDX53Q86TM3 AC106739.1-201ENST00000617035 715 ntBASIC24.89■■□□□ 1.58
DDX53Q86TM3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.89■■□□□ 1.57
DDX53Q86TM3 AC010501.1-201ENST00000606270 1962 ntBASIC24.89■■□□□ 1.57
DDX53Q86TM3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
DDX53Q86TM3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.88■■□□□ 1.57
DDX53Q86TM3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
DDX53Q86TM3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.88■■□□□ 1.57
DDX53Q86TM3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
DDX53Q86TM3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
DDX53Q86TM3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
DDX53Q86TM3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
DDX53Q86TM3 PBX2P1-201ENST00000493219 1291 ntBASIC24.87■■□□□ 1.57
DDX53Q86TM3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
DDX53Q86TM3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.87■■□□□ 1.57
DDX53Q86TM3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
DDX53Q86TM3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
DDX53Q86TM3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
DDX53Q86TM3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.86■■□□□ 1.57
DDX53Q86TM3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
DDX53Q86TM3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
DDX53Q86TM3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
DDX53Q86TM3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
DDX53Q86TM3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
DDX53Q86TM3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
DDX53Q86TM3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
DDX53Q86TM3 AC004448.1-201ENST00000458332 883 ntBASIC24.84■■□□□ 1.57
DDX53Q86TM3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
DDX53Q86TM3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.84■■□□□ 1.57
DDX53Q86TM3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
DDX53Q86TM3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.84■■□□□ 1.57
DDX53Q86TM3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.83■■□□□ 1.57
DDX53Q86TM3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.83■■□□□ 1.57
DDX53Q86TM3 UNC93B3-201ENST00000308076 687 ntBASIC24.83■■□□□ 1.57
DDX53Q86TM3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
DDX53Q86TM3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.83■■□□□ 1.57
DDX53Q86TM3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
DDX53Q86TM3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
DDX53Q86TM3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms