Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.46■■□□□ 1.51
PTCRAQ6ISU1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.46■■□□□ 1.51
PTCRAQ6ISU1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PTCRAQ6ISU1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.45■■□□□ 1.51
PTCRAQ6ISU1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PTCRAQ6ISU1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PTCRAQ6ISU1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PTCRAQ6ISU1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.45■■□□□ 1.5
PTCRAQ6ISU1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.45■■□□□ 1.5
PTCRAQ6ISU1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.45■■□□□ 1.5
PTCRAQ6ISU1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.45■■□□□ 1.5
PTCRAQ6ISU1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.45■■□□□ 1.5
PTCRAQ6ISU1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PTCRAQ6ISU1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.44■■□□□ 1.5
PTCRAQ6ISU1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.44■■□□□ 1.5
PTCRAQ6ISU1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.44■■□□□ 1.5
PTCRAQ6ISU1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PTCRAQ6ISU1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
PTCRAQ6ISU1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PTCRAQ6ISU1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PTCRAQ6ISU1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PTCRAQ6ISU1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PTCRAQ6ISU1 SERBP1P1-201ENST00000396021 1160 ntBASIC24.43■■□□□ 1.5
PTCRAQ6ISU1 AC034268.1-201ENST00000441047 882 ntBASIC24.43■■□□□ 1.5
PTCRAQ6ISU1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.43■■□□□ 1.5
PTCRAQ6ISU1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.43■■□□□ 1.5
PTCRAQ6ISU1 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.43■■□□□ 1.5
PTCRAQ6ISU1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
PTCRAQ6ISU1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PTCRAQ6ISU1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.42■■□□□ 1.5
PTCRAQ6ISU1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.42■■□□□ 1.5
PTCRAQ6ISU1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PTCRAQ6ISU1 AC099791.1-201ENST00000416440 715 ntBASIC24.41■■□□□ 1.5
PTCRAQ6ISU1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.41■■□□□ 1.5
PTCRAQ6ISU1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PTCRAQ6ISU1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.41■■□□□ 1.5
PTCRAQ6ISU1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PTCRAQ6ISU1 FOXO3B-201ENST00000395675 1928 ntBASIC24.41■■□□□ 1.5
PTCRAQ6ISU1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PTCRAQ6ISU1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
PTCRAQ6ISU1 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.4■■□□□ 1.5
PTCRAQ6ISU1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.4■■□□□ 1.5
PTCRAQ6ISU1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.4■■□□□ 1.5
PTCRAQ6ISU1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.4■■□□□ 1.5
PTCRAQ6ISU1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PTCRAQ6ISU1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.4■■□□□ 1.5
PTCRAQ6ISU1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PTCRAQ6ISU1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
PTCRAQ6ISU1 DRD5P2-201ENST00000421395 2012 ntBASIC24.39■■□□□ 1.5
PTCRAQ6ISU1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PTCRAQ6ISU1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PTCRAQ6ISU1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PTCRAQ6ISU1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.39■■□□□ 1.49
PTCRAQ6ISU1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.39■■□□□ 1.49
PTCRAQ6ISU1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.39■■□□□ 1.49
PTCRAQ6ISU1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.39■■□□□ 1.49
PTCRAQ6ISU1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PTCRAQ6ISU1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PTCRAQ6ISU1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.38■■□□□ 1.49
PTCRAQ6ISU1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
PTCRAQ6ISU1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PTCRAQ6ISU1 ID1-201ENST00000376105 1233 ntBASIC24.38■■□□□ 1.49
PTCRAQ6ISU1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.38■■□□□ 1.49
PTCRAQ6ISU1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PTCRAQ6ISU1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PTCRAQ6ISU1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 AC090877.2-201ENST00000558441 1738 ntBASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PTCRAQ6ISU1 SLC47A1P1-202ENST00000449666 945 ntBASIC24.36■■□□□ 1.49
PTCRAQ6ISU1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.36■■□□□ 1.49
PTCRAQ6ISU1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PTCRAQ6ISU1 AC011298.3-201ENST00000615796 283 ntBASIC24.36■■□□□ 1.49
PTCRAQ6ISU1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PTCRAQ6ISU1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTCRAQ6ISU1 AC005703.6-201ENST00000623265 1329 ntBASIC24.35■■□□□ 1.49
PTCRAQ6ISU1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PTCRAQ6ISU1 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.35■■□□□ 1.49
PTCRAQ6ISU1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.35■■□□□ 1.49
PTCRAQ6ISU1 KRT18P5-201ENST00000436075 1291 ntBASIC24.35■■□□□ 1.49
PTCRAQ6ISU1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PTCRAQ6ISU1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.35■■□□□ 1.49
PTCRAQ6ISU1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.35■■□□□ 1.49
PTCRAQ6ISU1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PTCRAQ6ISU1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PTCRAQ6ISU1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
PTCRAQ6ISU1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PTCRAQ6ISU1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PTCRAQ6ISU1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PTCRAQ6ISU1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms