Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LCN1P1Q5VSP4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21■□□□□ 0.95
LCN1P1Q5VSP4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LCN1P1Q5VSP4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21■□□□□ 0.95
LCN1P1Q5VSP4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21■□□□□ 0.95
LCN1P1Q5VSP4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21■□□□□ 0.95
LCN1P1Q5VSP4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LCN1P1Q5VSP4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LCN1P1Q5VSP4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LCN1P1Q5VSP4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21■□□□□ 0.95
LCN1P1Q5VSP4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21■□□□□ 0.95
LCN1P1Q5VSP4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21■□□□□ 0.95
LCN1P1Q5VSP4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P1Q5VSP4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.99■□□□□ 0.95
LCN1P1Q5VSP4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P1Q5VSP4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P1Q5VSP4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P1Q5VSP4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LCN1P1Q5VSP4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P1Q5VSP4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P1Q5VSP4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P1Q5VSP4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P1Q5VSP4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P1Q5VSP4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCN1P1Q5VSP4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LCN1P1Q5VSP4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.98■□□□□ 0.95
LCN1P1Q5VSP4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LCN1P1Q5VSP4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCN1P1Q5VSP4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCN1P1Q5VSP4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCN1P1Q5VSP4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCN1P1Q5VSP4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LCN1P1Q5VSP4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCN1P1Q5VSP4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCN1P1Q5VSP4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCN1P1Q5VSP4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LCN1P1Q5VSP4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.97■□□□□ 0.95
LCN1P1Q5VSP4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCN1P1Q5VSP4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCN1P1Q5VSP4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCN1P1Q5VSP4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCN1P1Q5VSP4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.96■□□□□ 0.95
LCN1P1Q5VSP4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.96■□□□□ 0.95
LCN1P1Q5VSP4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCN1P1Q5VSP4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCN1P1Q5VSP4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LCN1P1Q5VSP4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCN1P1Q5VSP4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.95■□□□□ 0.94
LCN1P1Q5VSP4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LCN1P1Q5VSP4 AC092296.2-201ENST00000589470 999 ntBASIC20.95■□□□□ 0.94
LCN1P1Q5VSP4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.95■□□□□ 0.94
LCN1P1Q5VSP4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.95■□□□□ 0.94
LCN1P1Q5VSP4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCN1P1Q5VSP4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCN1P1Q5VSP4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCN1P1Q5VSP4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LCN1P1Q5VSP4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.94■□□□□ 0.94
LCN1P1Q5VSP4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCN1P1Q5VSP4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.94■□□□□ 0.94
LCN1P1Q5VSP4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LCN1P1Q5VSP4 RP9P-202ENST00000450133 1212 ntBASIC20.94■□□□□ 0.94
LCN1P1Q5VSP4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCN1P1Q5VSP4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCN1P1Q5VSP4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.93■□□□□ 0.94
LCN1P1Q5VSP4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCN1P1Q5VSP4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCN1P1Q5VSP4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCN1P1Q5VSP4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCN1P1Q5VSP4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCN1P1Q5VSP4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCN1P1Q5VSP4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCN1P1Q5VSP4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCN1P1Q5VSP4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LCN1P1Q5VSP4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCN1P1Q5VSP4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCN1P1Q5VSP4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCN1P1Q5VSP4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCN1P1Q5VSP4 ECEL1P2-201ENST00000461596 1295 ntBASIC20.92■□□□□ 0.94
LCN1P1Q5VSP4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.92■□□□□ 0.94
LCN1P1Q5VSP4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCN1P1Q5VSP4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.92■□□□□ 0.94
LCN1P1Q5VSP4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCN1P1Q5VSP4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LCN1P1Q5VSP4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LCN1P1Q5VSP4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
LCN1P1Q5VSP4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LCN1P1Q5VSP4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LCN1P1Q5VSP4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LCN1P1Q5VSP4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.91■□□□□ 0.94
LCN1P1Q5VSP4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.91■□□□□ 0.94
LCN1P1Q5VSP4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
LCN1P1Q5VSP4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LCN1P1Q5VSP4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCN1P1Q5VSP4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCN1P1Q5VSP4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCN1P1Q5VSP4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCN1P1Q5VSP4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.9■□□□□ 0.94
LCN1P1Q5VSP4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LCN1P1Q5VSP4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.9■□□□□ 0.94
LCN1P1Q5VSP4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms