Protein–RNA interactions for Protein: Q15822

CHRNA2, Neuronal acetylcholine receptor subunit alpha-2, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2Q15822 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHRNA2Q15822 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.56■■■□□ 2.64
CHRNA2Q15822 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CHRNA2Q15822 AC090877.2-201ENST00000558441 1738 ntBASIC31.56■■■□□ 2.64
CHRNA2Q15822 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.56■■■□□ 2.64
CHRNA2Q15822 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHRNA2Q15822 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHRNA2Q15822 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHRNA2Q15822 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31.55■■■□□ 2.64
CHRNA2Q15822 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CHRNA2Q15822 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHRNA2Q15822 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.54■■■□□ 2.64
CHRNA2Q15822 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHRNA2Q15822 MIR939-201ENST00000401314 82 ntBASIC31.54■■■□□ 2.64
CHRNA2Q15822 AP001330.3-201ENST00000520123 633 ntBASIC31.54■■■□□ 2.64
CHRNA2Q15822 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
CHRNA2Q15822 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHRNA2Q15822 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.54■■■□□ 2.64
CHRNA2Q15822 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.54■■■□□ 2.64
CHRNA2Q15822 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CHRNA2Q15822 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CHRNA2Q15822 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
CHRNA2Q15822 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
CHRNA2Q15822 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHRNA2Q15822 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
CHRNA2Q15822 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31.53■■■□□ 2.64
CHRNA2Q15822 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC31.53■■■□□ 2.64
CHRNA2Q15822 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.53■■■□□ 2.64
CHRNA2Q15822 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CHRNA2Q15822 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.52■■■□□ 2.64
CHRNA2Q15822 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CHRNA2Q15822 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CHRNA2Q15822 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CHRNA2Q15822 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CHRNA2Q15822 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
CHRNA2Q15822 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
CHRNA2Q15822 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHRNA2Q15822 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHRNA2Q15822 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.51■■■□□ 2.63
CHRNA2Q15822 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31.51■■■□□ 2.63
CHRNA2Q15822 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHRNA2Q15822 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
CHRNA2Q15822 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CHRNA2Q15822 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.5■■■□□ 2.63
CHRNA2Q15822 PARL-206ENST00000435888 1098 ntTSL 5 BASIC31.5■■■□□ 2.63
CHRNA2Q15822 AC087623.3-201ENST00000607047 1098 ntBASIC31.5■■■□□ 2.63
CHRNA2Q15822 MIR6821-201ENST00000617625 74 ntBASIC31.5■■■□□ 2.63
CHRNA2Q15822 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CHRNA2Q15822 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.5■■■□□ 2.63
CHRNA2Q15822 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC31.49■■■□□ 2.63
CHRNA2Q15822 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHRNA2Q15822 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.49■■■□□ 2.63
CHRNA2Q15822 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHRNA2Q15822 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CHRNA2Q15822 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHRNA2Q15822 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CHRNA2Q15822 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CHRNA2Q15822 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CHRNA2Q15822 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.46■■■□□ 2.63
CHRNA2Q15822 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CHRNA2Q15822 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CHRNA2Q15822 AC097381.1-201ENST00000429019 1296 ntBASIC31.45■■■□□ 2.63
CHRNA2Q15822 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHRNA2Q15822 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC31.45■■■□□ 2.63
CHRNA2Q15822 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHRNA2Q15822 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CHRNA2Q15822 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.44■■■□□ 2.62
CHRNA2Q15822 AL162430.1-201ENST00000480705 870 ntBASIC31.44■■■□□ 2.62
CHRNA2Q15822 MAG-206ENST00000597035 542 ntTSL 4 BASIC31.44■■■□□ 2.62
CHRNA2Q15822 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CHRNA2Q15822 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.43■■■□□ 2.62
CHRNA2Q15822 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CHRNA2Q15822 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC31.43■■■□□ 2.62
CHRNA2Q15822 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHRNA2Q15822 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CHRNA2Q15822 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHRNA2Q15822 MIR4767-201ENST00000582827 78 ntBASIC31.42■■■□□ 2.62
CHRNA2Q15822 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC31.42■■■□□ 2.62
CHRNA2Q15822 AC091305.1-201ENST00000479476 895 ntBASIC31.41■■■□□ 2.62
CHRNA2Q15822 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.41■■■□□ 2.62
CHRNA2Q15822 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.41■■■□□ 2.62
CHRNA2Q15822 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHRNA2Q15822 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHRNA2Q15822 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CHRNA2Q15822 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHRNA2Q15822 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHRNA2Q15822 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHRNA2Q15822 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.39■■■□□ 2.62
CHRNA2Q15822 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHRNA2Q15822 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
CHRNA2Q15822 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CHRNA2Q15822 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.39■■■□□ 2.62
CHRNA2Q15822 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHRNA2Q15822 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHRNA2Q15822 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHRNA2Q15822 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
CHRNA2Q15822 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHRNA2Q15822 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHRNA2Q15822 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC31.37■■■□□ 2.61
CHRNA2Q15822 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms