Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H1AQ02539 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST1H1AQ02539 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HIST1H1AQ02539 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1AQ02539 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1AQ02539 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1AQ02539 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1AQ02539 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1AQ02539 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1AQ02539 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1AQ02539 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1AQ02539 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.7■□□□□ 0.42
HIST1H1AQ02539 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.7■□□□□ 0.42
HIST1H1AQ02539 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
HIST1H1AQ02539 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1AQ02539 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1AQ02539 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1AQ02539 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HIST1H1AQ02539 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HIST1H1AQ02539 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.69■□□□□ 0.42
HIST1H1AQ02539 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1AQ02539 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1AQ02539 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1AQ02539 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1AQ02539 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST1H1AQ02539 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 LINC01124-201ENST00000409786 2117 ntBASIC17.68■□□□□ 0.42
HIST1H1AQ02539 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 AC068473.5-201ENST00000616428 2072 ntBASIC17.68■□□□□ 0.42
HIST1H1AQ02539 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1AQ02539 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1AQ02539 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HIST1H1AQ02539 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1AQ02539 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1AQ02539 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1AQ02539 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1AQ02539 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HIST1H1AQ02539 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1AQ02539 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST1H1AQ02539 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1AQ02539 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H1AQ02539 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H1AQ02539 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.66■□□□□ 0.42
HIST1H1AQ02539 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H1AQ02539 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H1AQ02539 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
HIST1H1AQ02539 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H1AQ02539 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H1AQ02539 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H1AQ02539 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HIST1H1AQ02539 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HIST1H1AQ02539 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.65■□□□□ 0.42
HIST1H1AQ02539 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HIST1H1AQ02539 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.64■□□□□ 0.41
HIST1H1AQ02539 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H1AQ02539 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H1AQ02539 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H1AQ02539 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.64■□□□□ 0.41
HIST1H1AQ02539 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.64■□□□□ 0.41
HIST1H1AQ02539 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.64■□□□□ 0.41
HIST1H1AQ02539 AC026202.3-201ENST00000600805 1127 ntBASIC17.64■□□□□ 0.41
HIST1H1AQ02539 RAP2CP1-202ENST00000605179 643 ntBASIC17.64■□□□□ 0.41
HIST1H1AQ02539 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H1AQ02539 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H1AQ02539 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H1AQ02539 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H1AQ02539 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HIST1H1AQ02539 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 AC141586.4-201ENST00000624558 1573 ntBASIC17.63■□□□□ 0.41
HIST1H1AQ02539 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H1AQ02539 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms