Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.7■■□□□ 1.22
PDX1P52945 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.7■■□□□ 1.22
PDX1P52945 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.69■■□□□ 1.22
PDX1P52945 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.69■■□□□ 1.22
PDX1P52945 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PDX1P52945 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.69■■□□□ 1.22
PDX1P52945 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PDX1P52945 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PDX1P52945 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.68■■□□□ 1.22
PDX1P52945 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.68■■□□□ 1.22
PDX1P52945 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.68■■□□□ 1.22
PDX1P52945 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PDX1P52945 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDX1P52945 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.68■■□□□ 1.22
PDX1P52945 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.68■■□□□ 1.22
PDX1P52945 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.68■■□□□ 1.22
PDX1P52945 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
PDX1P52945 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDX1P52945 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PDX1P52945 AF131216.4-201ENST00000638924 1588 ntBASIC22.67■■□□□ 1.22
PDX1P52945 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
PDX1P52945 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PDX1P52945 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDX1P52945 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PDX1P52945 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
PDX1P52945 MIR4466-201ENST00000606121 54 ntBASIC22.67■■□□□ 1.22
PDX1P52945 AC110285.6-201ENST00000617652 491 ntBASIC22.67■■□□□ 1.22
PDX1P52945 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDX1P52945 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDX1P52945 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDX1P52945 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PDX1P52945 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDX1P52945 DUSP8P4-201ENST00000399538 1761 ntBASIC22.66■■□□□ 1.22
PDX1P52945 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.66■■□□□ 1.22
PDX1P52945 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PDX1P52945 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDX1P52945 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PDX1P52945 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PDX1P52945 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDX1P52945 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.65■■□□□ 1.22
PDX1P52945 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDX1P52945 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDX1P52945 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PDX1P52945 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.65■■□□□ 1.22
PDX1P52945 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PDX1P52945 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDX1P52945 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDX1P52945 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PDX1P52945 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDX1P52945 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDX1P52945 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.64■■□□□ 1.21
PDX1P52945 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.64■■□□□ 1.21
PDX1P52945 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDX1P52945 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PDX1P52945 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDX1P52945 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDX1P52945 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDX1P52945 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.63■■□□□ 1.21
PDX1P52945 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.63■■□□□ 1.21
PDX1P52945 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.63■■□□□ 1.21
PDX1P52945 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.63■■□□□ 1.21
PDX1P52945 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.63■■□□□ 1.21
PDX1P52945 AL512631.2-201ENST00000604634 923 ntBASIC22.63■■□□□ 1.21
PDX1P52945 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDX1P52945 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.62■■□□□ 1.21
PDX1P52945 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.62■■□□□ 1.21
PDX1P52945 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.62■■□□□ 1.21
PDX1P52945 AL356740.2-201ENST00000601559 647 ntBASIC22.62■■□□□ 1.21
PDX1P52945 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDX1P52945 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDX1P52945 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.62■■□□□ 1.21
PDX1P52945 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDX1P52945 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.61■■□□□ 1.21
PDX1P52945 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDX1P52945 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDX1P52945 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.61■■□□□ 1.21
PDX1P52945 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.61■■□□□ 1.21
PDX1P52945 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.61■■□□□ 1.21
PDX1P52945 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.61■■□□□ 1.21
PDX1P52945 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PDX1P52945 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDX1P52945 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.6■■□□□ 1.21
PDX1P52945 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDX1P52945 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.6■■□□□ 1.21
PDX1P52945 FOXO3B-201ENST00000395675 1928 ntBASIC22.6■■□□□ 1.21
PDX1P52945 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDX1P52945 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PDX1P52945 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDX1P52945 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDX1P52945 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDX1P52945 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.59■■□□□ 1.21
PDX1P52945 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDX1P52945 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.59■■□□□ 1.21
PDX1P52945 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.59■■□□□ 1.21
PDX1P52945 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDX1P52945 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDX1P52945 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.58■■□□□ 1.21
PDX1P52945 ERN1-208ENST00000606895 2068 ntBASIC22.58■■□□□ 1.21
PDX1P52945 AC096631.2-201ENST00000436136 790 ntBASIC22.58■■□□□ 1.21
PDX1P52945 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms