Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
COL1A1P02452 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
COL1A1P02452 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
COL1A1P02452 AL136116.3-201ENST00000402907 1138 ntBASIC28.49■■■□□ 2.15
COL1A1P02452 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
COL1A1P02452 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.49■■■□□ 2.15
COL1A1P02452 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.49■■■□□ 2.15
COL1A1P02452 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
COL1A1P02452 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL1A1P02452 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC28.48■■■□□ 2.15
COL1A1P02452 MIR6724-1-201ENST00000616420 92 ntBASIC28.48■■■□□ 2.15
COL1A1P02452 MIR6724-2-201ENST00000616483 92 ntBASIC28.48■■■□□ 2.15
COL1A1P02452 MIR6724-4-201ENST00000617390 92 ntBASIC28.48■■■□□ 2.15
COL1A1P02452 MIR6724-3-201ENST00000622482 92 ntBASIC28.48■■■□□ 2.15
COL1A1P02452 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
COL1A1P02452 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
COL1A1P02452 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.48■■■□□ 2.15
COL1A1P02452 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.47■■■□□ 2.15
COL1A1P02452 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.47■■■□□ 2.15
COL1A1P02452 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.47■■■□□ 2.15
COL1A1P02452 MIR3621-201ENST00000580529 85 ntBASIC28.47■■■□□ 2.15
COL1A1P02452 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.47■■■□□ 2.15
COL1A1P02452 AC091060.1-201ENST00000623524 1766 ntBASIC28.47■■■□□ 2.15
COL1A1P02452 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
COL1A1P02452 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.47■■■□□ 2.15
COL1A1P02452 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.47■■■□□ 2.15
COL1A1P02452 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
COL1A1P02452 MTDHP2-201ENST00000601468 714 ntBASIC28.46■■■□□ 2.15
COL1A1P02452 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL1A1P02452 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC28.46■■■□□ 2.15
COL1A1P02452 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
COL1A1P02452 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
COL1A1P02452 AC010997.5-201ENST00000609182 354 ntBASIC28.45■■■□□ 2.14
COL1A1P02452 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
COL1A1P02452 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
COL1A1P02452 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COL1A1P02452 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COL1A1P02452 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
COL1A1P02452 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
COL1A1P02452 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC28.43■■■□□ 2.14
COL1A1P02452 AC110285.6-201ENST00000617652 491 ntBASIC28.43■■■□□ 2.14
COL1A1P02452 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
COL1A1P02452 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
COL1A1P02452 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
COL1A1P02452 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
COL1A1P02452 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL1A1P02452 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL1A1P02452 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
COL1A1P02452 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.42■■■□□ 2.14
COL1A1P02452 SNX5-217ENST00000606557 1087 ntBASIC28.42■■■□□ 2.14
COL1A1P02452 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.42■■■□□ 2.14
COL1A1P02452 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
COL1A1P02452 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC28.41■■■□□ 2.14
COL1A1P02452 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
COL1A1P02452 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC28.4■■■□□ 2.14
COL1A1P02452 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC28.4■■■□□ 2.14
COL1A1P02452 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.4■■■□□ 2.14
COL1A1P02452 CLTA-210ENST00000540080 989 ntTSL 2 BASIC28.4■■■□□ 2.14
COL1A1P02452 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
COL1A1P02452 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC28.4■■■□□ 2.14
COL1A1P02452 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC28.4■■■□□ 2.14
COL1A1P02452 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.4■■■□□ 2.14
COL1A1P02452 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
COL1A1P02452 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
COL1A1P02452 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
COL1A1P02452 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.39■■■□□ 2.14
COL1A1P02452 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
COL1A1P02452 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.13
COL1A1P02452 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.38■■■□□ 2.13
COL1A1P02452 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.38■■■□□ 2.13
COL1A1P02452 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
COL1A1P02452 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
COL1A1P02452 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
COL1A1P02452 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.38■■■□□ 2.13
COL1A1P02452 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC28.38■■■□□ 2.13
COL1A1P02452 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
COL1A1P02452 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
COL1A1P02452 SLC6A10P-202ENST00000431994 2058 ntBASIC28.37■■■□□ 2.13
COL1A1P02452 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC28.37■■■□□ 2.13
COL1A1P02452 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
COL1A1P02452 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
COL1A1P02452 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.37■■■□□ 2.13
COL1A1P02452 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.37■■■□□ 2.13
COL1A1P02452 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
COL1A1P02452 EXOG-217ENST00000630638 197 ntTSL 5 BASIC28.37■■■□□ 2.13
COL1A1P02452 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
COL1A1P02452 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
COL1A1P02452 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.37■■■□□ 2.13
COL1A1P02452 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
COL1A1P02452 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.36■■■□□ 2.13
COL1A1P02452 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.36■■■□□ 2.13
COL1A1P02452 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
COL1A1P02452 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
COL1A1P02452 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.35■■■□□ 2.13
COL1A1P02452 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC28.35■■■□□ 2.13
COL1A1P02452 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
COL1A1P02452 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
COL1A1P02452 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC28.34■■■□□ 2.13
COL1A1P02452 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.34■■■□□ 2.13
COL1A1P02452 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms