Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NKX2-2O95096 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.63■■□□□ 1.05
NKX2-2O95096 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-2O95096 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-2O95096 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.63■■□□□ 1.05
NKX2-2O95096 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-2O95096 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-2O95096 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-2O95096 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NKX2-2O95096 LINC01124-201ENST00000409786 2117 ntBASIC21.63■■□□□ 1.05
NKX2-2O95096 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.63■■□□□ 1.05
NKX2-2O95096 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.63■■□□□ 1.05
NKX2-2O95096 AC010980.1-201ENST00000587192 1142 ntBASIC21.63■■□□□ 1.05
NKX2-2O95096 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-2O95096 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-2O95096 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-2O95096 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NKX2-2O95096 AC093323.1-202ENST00000635031 2045 ntBASIC21.62■■□□□ 1.05
NKX2-2O95096 HLA-L-211ENST00000482052 1765 ntBASIC21.62■■□□□ 1.05
NKX2-2O95096 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NKX2-2O95096 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.62■■□□□ 1.05
NKX2-2O95096 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NKX2-2O95096 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NKX2-2O95096 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NKX2-2O95096 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.61■■□□□ 1.05
NKX2-2O95096 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-2O95096 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-2O95096 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-2O95096 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.61■■□□□ 1.05
NKX2-2O95096 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-2O95096 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.61■■□□□ 1.05
NKX2-2O95096 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.61■■□□□ 1.05
NKX2-2O95096 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.61■■□□□ 1.05
NKX2-2O95096 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-2O95096 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-2O95096 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.61■■□□□ 1.05
NKX2-2O95096 LINC00543-201ENST00000567234 1845 ntBASIC21.6■■□□□ 1.05
NKX2-2O95096 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.6■■□□□ 1.05
NKX2-2O95096 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.6■■□□□ 1.05
NKX2-2O95096 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.6■■□□□ 1.05
NKX2-2O95096 AC011551.1-201ENST00000614101 683 ntBASIC21.6■■□□□ 1.05
NKX2-2O95096 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.6■■□□□ 1.05
NKX2-2O95096 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.6■■□□□ 1.05
NKX2-2O95096 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-2O95096 AC141586.4-201ENST00000624558 1573 ntBASIC21.6■■□□□ 1.05
NKX2-2O95096 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.6■■□□□ 1.05
NKX2-2O95096 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-2O95096 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.59■■□□□ 1.05
NKX2-2O95096 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-2O95096 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-2O95096 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-2O95096 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-2O95096 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-2O95096 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-2O95096 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.59■■□□□ 1.05
NKX2-2O95096 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.59■■□□□ 1.05
NKX2-2O95096 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NKX2-2O95096 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-2O95096 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-2O95096 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
NKX2-2O95096 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NKX2-2O95096 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NKX2-2O95096 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
NKX2-2O95096 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
NKX2-2O95096 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
NKX2-2O95096 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NKX2-2O95096 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.58■■□□□ 1.04
NKX2-2O95096 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NKX2-2O95096 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NKX2-2O95096 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.57■■□□□ 1.04
NKX2-2O95096 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NKX2-2O95096 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NKX2-2O95096 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NKX2-2O95096 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NKX2-2O95096 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NKX2-2O95096 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NKX2-2O95096 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NKX2-2O95096 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NKX2-2O95096 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.56■■□□□ 1.04
NKX2-2O95096 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.56■■□□□ 1.04
NKX2-2O95096 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NKX2-2O95096 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
NKX2-2O95096 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NKX2-2O95096 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NKX2-2O95096 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NKX2-2O95096 MIR4508-201ENST00000584178 70 ntBASIC21.55■■□□□ 1.04
NKX2-2O95096 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
NKX2-2O95096 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NKX2-2O95096 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NKX2-2O95096 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NKX2-2O95096 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.55■■□□□ 1.04
NKX2-2O95096 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.54■■□□□ 1.04
NKX2-2O95096 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.54■■□□□ 1.04
NKX2-2O95096 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
NKX2-2O95096 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NKX2-2O95096 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NKX2-2O95096 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NKX2-2O95096 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.53■■□□□ 1.04
NKX2-2O95096 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NKX2-2O95096 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms