Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CSDE1O75534 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.7■■□□□ 1.71
CSDE1O75534 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CSDE1O75534 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.7■■□□□ 1.7
CSDE1O75534 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.7■■□□□ 1.7
CSDE1O75534 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
CSDE1O75534 AC145676.1-201ENST00000514988 2004 ntBASIC25.7■■□□□ 1.7
CSDE1O75534 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSDE1O75534 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSDE1O75534 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CSDE1O75534 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CSDE1O75534 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CSDE1O75534 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CSDE1O75534 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CSDE1O75534 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CSDE1O75534 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.68■■□□□ 1.7
CSDE1O75534 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.68■■□□□ 1.7
CSDE1O75534 AC010997.5-201ENST00000609182 354 ntBASIC25.68■■□□□ 1.7
CSDE1O75534 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.68■■□□□ 1.7
CSDE1O75534 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CSDE1O75534 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CSDE1O75534 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.67■■□□□ 1.7
CSDE1O75534 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSDE1O75534 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.67■■□□□ 1.7
CSDE1O75534 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.67■■□□□ 1.7
CSDE1O75534 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSDE1O75534 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CSDE1O75534 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.66■■□□□ 1.7
CSDE1O75534 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.66■■□□□ 1.7
CSDE1O75534 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.66■■□□□ 1.7
CSDE1O75534 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CSDE1O75534 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CSDE1O75534 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CSDE1O75534 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CSDE1O75534 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.65■■□□□ 1.7
CSDE1O75534 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CSDE1O75534 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CSDE1O75534 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.65■■□□□ 1.7
CSDE1O75534 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CSDE1O75534 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CSDE1O75534 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CSDE1O75534 AC008406.3-201ENST00000620001 1374 ntBASIC25.65■■□□□ 1.7
CSDE1O75534 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.64■■□□□ 1.7
CSDE1O75534 MTDHP2-201ENST00000601468 714 ntBASIC25.64■■□□□ 1.7
CSDE1O75534 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CSDE1O75534 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.64■■□□□ 1.69
CSDE1O75534 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.63■■□□□ 1.69
CSDE1O75534 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.63■■□□□ 1.69
CSDE1O75534 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.63■■□□□ 1.69
CSDE1O75534 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.63■■□□□ 1.69
CSDE1O75534 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CSDE1O75534 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.63■■□□□ 1.69
CSDE1O75534 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.63■■□□□ 1.69
CSDE1O75534 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CSDE1O75534 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CSDE1O75534 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CSDE1O75534 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.62■■□□□ 1.69
CSDE1O75534 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.62■■□□□ 1.69
CSDE1O75534 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.62■■□□□ 1.69
CSDE1O75534 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSDE1O75534 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CSDE1O75534 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CSDE1O75534 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSDE1O75534 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CSDE1O75534 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CSDE1O75534 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CSDE1O75534 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.6■■□□□ 1.69
CSDE1O75534 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CSDE1O75534 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.59■■□□□ 1.69
CSDE1O75534 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CSDE1O75534 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CSDE1O75534 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.58■■□□□ 1.69
CSDE1O75534 AL117332.1-201ENST00000622628 974 ntBASIC25.58■■□□□ 1.69
CSDE1O75534 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
CSDE1O75534 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.57■■□□□ 1.68
CSDE1O75534 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
CSDE1O75534 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CSDE1O75534 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.57■■□□□ 1.68
CSDE1O75534 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.57■■□□□ 1.68
CSDE1O75534 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.57■■□□□ 1.68
CSDE1O75534 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.57■■□□□ 1.68
CSDE1O75534 MIR6724-1-201ENST00000616420 92 ntBASIC25.57■■□□□ 1.68
CSDE1O75534 MIR6724-2-201ENST00000616483 92 ntBASIC25.57■■□□□ 1.68
CSDE1O75534 MIR6724-4-201ENST00000617390 92 ntBASIC25.57■■□□□ 1.68
CSDE1O75534 MIR6724-3-201ENST00000622482 92 ntBASIC25.57■■□□□ 1.68
CSDE1O75534 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.56■■□□□ 1.68
CSDE1O75534 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.56■■□□□ 1.68
CSDE1O75534 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.56■■□□□ 1.68
CSDE1O75534 SNX5-217ENST00000606557 1087 ntBASIC25.56■■□□□ 1.68
CSDE1O75534 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.56■■□□□ 1.68
CSDE1O75534 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.56■■□□□ 1.68
CSDE1O75534 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSDE1O75534 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.55■■□□□ 1.68
CSDE1O75534 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.55■■□□□ 1.68
CSDE1O75534 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CSDE1O75534 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CSDE1O75534 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CSDE1O75534 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CSDE1O75534 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.55■■□□□ 1.68
CSDE1O75534 AC131281.2-201ENST00000520478 145 ntBASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms