Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF254O75437 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ZNF254O75437 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF254O75437 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF254O75437 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF254O75437 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF254O75437 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF254O75437 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF254O75437 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.58■□□□□ 0.89
ZNF254O75437 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.58■□□□□ 0.89
ZNF254O75437 AC026202.3-201ENST00000600805 1127 ntBASIC20.58■□□□□ 0.89
ZNF254O75437 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF254O75437 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF254O75437 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
ZNF254O75437 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.58■□□□□ 0.88
ZNF254O75437 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF254O75437 AC012676.1-201ENST00000574705 1949 ntBASIC20.57■□□□□ 0.88
ZNF254O75437 GPX1-201ENST00000419349 1106 ntBASIC20.57■□□□□ 0.88
ZNF254O75437 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF254O75437 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ZNF254O75437 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF254O75437 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF254O75437 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF254O75437 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF254O75437 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF254O75437 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF254O75437 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF254O75437 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ZNF254O75437 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF254O75437 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.56■□□□□ 0.88
ZNF254O75437 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF254O75437 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF254O75437 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF254O75437 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
ZNF254O75437 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF254O75437 FOXO3B-201ENST00000395675 1928 ntBASIC20.55■□□□□ 0.88
ZNF254O75437 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF254O75437 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF254O75437 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF254O75437 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF254O75437 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF254O75437 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF254O75437 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF254O75437 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.55■□□□□ 0.88
ZNF254O75437 AC133561.1-201ENST00000568600 2415 ntBASIC20.55■□□□□ 0.88
ZNF254O75437 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF254O75437 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF254O75437 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF254O75437 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ZNF254O75437 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.54■□□□□ 0.88
ZNF254O75437 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF254O75437 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF254O75437 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF254O75437 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF254O75437 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF254O75437 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF254O75437 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF254O75437 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF254O75437 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF254O75437 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF254O75437 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.52■□□□□ 0.88
ZNF254O75437 AC004812.2-201ENST00000611079 2094 ntBASIC20.52■□□□□ 0.88
ZNF254O75437 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF254O75437 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ZNF254O75437 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF254O75437 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF254O75437 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF254O75437 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZNF254O75437 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF254O75437 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF254O75437 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF254O75437 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF254O75437 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF254O75437 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ZNF254O75437 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF254O75437 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF254O75437 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF254O75437 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF254O75437 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF254O75437 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.5■□□□□ 0.87
ZNF254O75437 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.5■□□□□ 0.87
ZNF254O75437 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF254O75437 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF254O75437 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.5■□□□□ 0.87
ZNF254O75437 AC068473.5-201ENST00000616428 2072 ntBASIC20.5■□□□□ 0.87
ZNF254O75437 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF254O75437 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.5■□□□□ 0.87
ZNF254O75437 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.49■□□□□ 0.87
ZNF254O75437 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF254O75437 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ZNF254O75437 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF254O75437 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF254O75437 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ZNF254O75437 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF254O75437 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.49■□□□□ 0.87
ZNF254O75437 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ZNF254O75437 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ZNF254O75437 HLA-L-211ENST00000482052 1765 ntBASIC20.49■□□□□ 0.87
ZNF254O75437 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF254O75437 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms