Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ERN1-208ENST00000606895 2068 ntBASIC22.32■■□□□ 1.16
CPNE3O75131 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPNE3O75131 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE3O75131 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.31■■□□□ 1.16
CPNE3O75131 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.31■■□□□ 1.16
CPNE3O75131 AC097639.1-201ENST00000565519 1891 ntBASIC22.31■■□□□ 1.16
CPNE3O75131 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE3O75131 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CPNE3O75131 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.31■■□□□ 1.16
CPNE3O75131 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE3O75131 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.3■■□□□ 1.16
CPNE3O75131 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE3O75131 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.3■■□□□ 1.16
CPNE3O75131 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE3O75131 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE3O75131 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CPNE3O75131 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE3O75131 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE3O75131 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.29■■□□□ 1.16
CPNE3O75131 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.29■■□□□ 1.16
CPNE3O75131 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE3O75131 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.29■■□□□ 1.16
CPNE3O75131 AC010501.1-201ENST00000606270 1962 ntBASIC22.29■■□□□ 1.16
CPNE3O75131 AC008406.3-201ENST00000620001 1374 ntBASIC22.28■■□□□ 1.16
CPNE3O75131 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.28■■□□□ 1.16
CPNE3O75131 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.28■■□□□ 1.16
CPNE3O75131 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.28■■□□□ 1.16
CPNE3O75131 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.28■■□□□ 1.16
CPNE3O75131 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.28■■□□□ 1.16
CPNE3O75131 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.28■■□□□ 1.16
CPNE3O75131 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE3O75131 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CPNE3O75131 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE3O75131 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE3O75131 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE3O75131 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE3O75131 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE3O75131 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE3O75131 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.27■■□□□ 1.16
CPNE3O75131 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.27■■□□□ 1.16
CPNE3O75131 MTDHP2-201ENST00000601468 714 ntBASIC22.27■■□□□ 1.16
CPNE3O75131 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.27■■□□□ 1.16
CPNE3O75131 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE3O75131 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CPNE3O75131 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE3O75131 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE3O75131 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.26■■□□□ 1.15
CPNE3O75131 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE3O75131 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.26■■□□□ 1.15
CPNE3O75131 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.26■■□□□ 1.15
CPNE3O75131 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.26■■□□□ 1.15
CPNE3O75131 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE3O75131 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE3O75131 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE3O75131 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE3O75131 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE3O75131 AC010997.5-201ENST00000609182 354 ntBASIC22.25■■□□□ 1.15
CPNE3O75131 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.25■■□□□ 1.15
CPNE3O75131 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE3O75131 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE3O75131 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CPNE3O75131 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE3O75131 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CPNE3O75131 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPNE3O75131 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.24■■□□□ 1.15
CPNE3O75131 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPNE3O75131 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPNE3O75131 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.24■■□□□ 1.15
CPNE3O75131 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.24■■□□□ 1.15
CPNE3O75131 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CPNE3O75131 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CPNE3O75131 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
CPNE3O75131 AC090877.2-201ENST00000558441 1738 ntBASIC22.23■■□□□ 1.15
CPNE3O75131 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.23■■□□□ 1.15
CPNE3O75131 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CPNE3O75131 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
CPNE3O75131 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CPNE3O75131 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.22■■□□□ 1.15
CPNE3O75131 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPNE3O75131 AF131216.4-201ENST00000638924 1588 ntBASIC22.22■■□□□ 1.15
CPNE3O75131 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.22■■□□□ 1.15
CPNE3O75131 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CPNE3O75131 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CPNE3O75131 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPNE3O75131 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.21■■□□□ 1.15
CPNE3O75131 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
CPNE3O75131 AC092803.2-201ENST00000564287 1899 ntBASIC22.21■■□□□ 1.15
CPNE3O75131 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPNE3O75131 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPNE3O75131 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPNE3O75131 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.2■■□□□ 1.15
CPNE3O75131 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPNE3O75131 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPNE3O75131 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CPNE3O75131 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPNE3O75131 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPNE3O75131 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CPNE3O75131 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.2■■□□□ 1.14
CPNE3O75131 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPNE3O75131 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms