Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CACNA1FO60840 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CACNA1FO60840 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CACNA1FO60840 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC29.76■■■□□ 2.36
CACNA1FO60840 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
CACNA1FO60840 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CACNA1FO60840 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CACNA1FO60840 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CACNA1FO60840 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CACNA1FO60840 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CACNA1FO60840 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CACNA1FO60840 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
CACNA1FO60840 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.75■■■□□ 2.35
CACNA1FO60840 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.75■■■□□ 2.35
CACNA1FO60840 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CACNA1FO60840 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CACNA1FO60840 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CACNA1FO60840 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CACNA1FO60840 KRT125P-201ENST00000546827 989 ntBASIC29.75■■■□□ 2.35
CACNA1FO60840 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CACNA1FO60840 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CACNA1FO60840 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CACNA1FO60840 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CACNA1FO60840 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CACNA1FO60840 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CACNA1FO60840 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
CACNA1FO60840 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.74■■■□□ 2.35
CACNA1FO60840 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
CACNA1FO60840 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CACNA1FO60840 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
CACNA1FO60840 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CACNA1FO60840 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC29.73■■■□□ 2.35
CACNA1FO60840 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CACNA1FO60840 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CACNA1FO60840 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.73■■■□□ 2.35
CACNA1FO60840 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CACNA1FO60840 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
CACNA1FO60840 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CACNA1FO60840 LSR-205ENST00000427250 1606 ntTSL 2 BASIC29.72■■■□□ 2.35
CACNA1FO60840 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.72■■■□□ 2.35
CACNA1FO60840 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
CACNA1FO60840 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.72■■■□□ 2.35
CACNA1FO60840 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CACNA1FO60840 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CACNA1FO60840 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CACNA1FO60840 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
CACNA1FO60840 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.72■■■□□ 2.35
CACNA1FO60840 AP003733.4-201ENST00000623785 1697 ntBASIC29.71■■■□□ 2.35
CACNA1FO60840 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC29.71■■■□□ 2.35
CACNA1FO60840 AC239859.2-201ENST00000444165 318 ntBASIC29.71■■■□□ 2.35
CACNA1FO60840 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.71■■■□□ 2.35
CACNA1FO60840 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC29.71■■■□□ 2.35
CACNA1FO60840 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.71■■■□□ 2.35
CACNA1FO60840 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC29.71■■■□□ 2.35
CACNA1FO60840 AC131274.2-201ENST00000580697 1507 ntBASIC29.7■■■□□ 2.35
CACNA1FO60840 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.34
CACNA1FO60840 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CACNA1FO60840 OR2A1-AS1-204ENST00000470435 602 ntBASIC29.7■■■□□ 2.34
CACNA1FO60840 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CACNA1FO60840 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CACNA1FO60840 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CACNA1FO60840 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CACNA1FO60840 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.68■■■□□ 2.34
CACNA1FO60840 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC29.68■■■□□ 2.34
CACNA1FO60840 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.68■■■□□ 2.34
CACNA1FO60840 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CACNA1FO60840 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC29.68■■■□□ 2.34
CACNA1FO60840 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CACNA1FO60840 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC29.68■■■□□ 2.34
CACNA1FO60840 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
CACNA1FO60840 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.68■■■□□ 2.34
CACNA1FO60840 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CACNA1FO60840 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CACNA1FO60840 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CACNA1FO60840 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CACNA1FO60840 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
CACNA1FO60840 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.67■■■□□ 2.34
CACNA1FO60840 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC29.67■■■□□ 2.34
CACNA1FO60840 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CACNA1FO60840 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CACNA1FO60840 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
CACNA1FO60840 UNC93B8-201ENST00000511903 705 ntBASIC29.66■■■□□ 2.34
CACNA1FO60840 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
CACNA1FO60840 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CACNA1FO60840 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CACNA1FO60840 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CACNA1FO60840 KRT16P3-201ENST00000439127 1283 ntBASIC29.66■■■□□ 2.34
CACNA1FO60840 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.66■■■□□ 2.34
CACNA1FO60840 AC092028.1-203ENST00000608262 953 ntBASIC29.66■■■□□ 2.34
CACNA1FO60840 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
CACNA1FO60840 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CACNA1FO60840 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
CACNA1FO60840 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CACNA1FO60840 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CACNA1FO60840 CREM-229ENST00000474362 1030 ntTSL 2 BASIC29.65■■■□□ 2.34
CACNA1FO60840 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.65■■■□□ 2.34
CACNA1FO60840 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.65■■■□□ 2.34
CACNA1FO60840 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC29.65■■■□□ 2.34
CACNA1FO60840 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CACNA1FO60840 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.65■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms