Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
GDF9O60383 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.05■■□□□ 1.28
GDF9O60383 CA15P2-201ENST00000611168 834 ntBASIC23.05■■□□□ 1.28
GDF9O60383 IKBKGP1-201ENST00000612193 1073 ntBASIC23.05■■□□□ 1.28
GDF9O60383 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
GDF9O60383 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GDF9O60383 AC004448.1-201ENST00000458332 883 ntBASIC23.04■■□□□ 1.28
GDF9O60383 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.04■■□□□ 1.28
GDF9O60383 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.04■■□□□ 1.28
GDF9O60383 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.04■■□□□ 1.28
GDF9O60383 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.04■■□□□ 1.28
GDF9O60383 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
GDF9O60383 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
GDF9O60383 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GDF9O60383 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.03■■□□□ 1.28
GDF9O60383 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.03■■□□□ 1.28
GDF9O60383 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
GDF9O60383 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GDF9O60383 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.03■■□□□ 1.28
GDF9O60383 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
GDF9O60383 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
GDF9O60383 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
GDF9O60383 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.02■■□□□ 1.28
GDF9O60383 MIR4767-201ENST00000582827 78 ntBASIC23.02■■□□□ 1.28
GDF9O60383 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
GDF9O60383 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GDF9O60383 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GDF9O60383 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
GDF9O60383 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
GDF9O60383 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.01■■□□□ 1.27
GDF9O60383 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GDF9O60383 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23■■□□□ 1.27
GDF9O60383 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23■■□□□ 1.27
GDF9O60383 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23■■□□□ 1.27
GDF9O60383 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
GDF9O60383 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
GDF9O60383 RASA4CP-201ENST00000424092 1398 ntBASIC23■■□□□ 1.27
GDF9O60383 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
GDF9O60383 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
GDF9O60383 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
GDF9O60383 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
GDF9O60383 DUX4L19-201ENST00000557448 1267 ntBASIC22.99■■□□□ 1.27
GDF9O60383 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
GDF9O60383 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.98■■□□□ 1.27
GDF9O60383 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.98■■□□□ 1.27
GDF9O60383 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
GDF9O60383 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.98■■□□□ 1.27
GDF9O60383 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.98■■□□□ 1.27
GDF9O60383 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
GDF9O60383 IRS3P-201ENST00000223076 1006 ntBASIC22.97■■□□□ 1.27
GDF9O60383 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.97■■□□□ 1.27
GDF9O60383 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
GDF9O60383 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
GDF9O60383 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.97■■□□□ 1.27
GDF9O60383 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.97■■□□□ 1.27
GDF9O60383 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.97■■□□□ 1.27
GDF9O60383 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
GDF9O60383 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
GDF9O60383 SYT6-210ENST00000641643 1587 ntBASIC22.97■■□□□ 1.27
GDF9O60383 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
GDF9O60383 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
GDF9O60383 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
GDF9O60383 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.96■■□□□ 1.27
GDF9O60383 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
GDF9O60383 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.96■■□□□ 1.27
GDF9O60383 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.96■■□□□ 1.27
GDF9O60383 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
GDF9O60383 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
GDF9O60383 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
GDF9O60383 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
GDF9O60383 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.95■■□□□ 1.26
GDF9O60383 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.95■■□□□ 1.26
GDF9O60383 AC022517.1-201ENST00000592429 346 ntBASIC22.95■■□□□ 1.26
GDF9O60383 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
GDF9O60383 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
GDF9O60383 AC142472.1-201ENST00000612013 1741 ntBASIC22.94■■□□□ 1.26
GDF9O60383 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
GDF9O60383 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
GDF9O60383 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.93■■□□□ 1.26
GDF9O60383 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.93■■□□□ 1.26
GDF9O60383 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
GDF9O60383 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.92■■□□□ 1.26
GDF9O60383 AP004609.3-201ENST00000610705 1884 ntBASIC22.92■■□□□ 1.26
GDF9O60383 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
GDF9O60383 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
GDF9O60383 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.92■■□□□ 1.26
GDF9O60383 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.92■■□□□ 1.26
GDF9O60383 AC008764.7-201ENST00000593779 1081 ntBASIC22.92■■□□□ 1.26
GDF9O60383 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.92■■□□□ 1.26
GDF9O60383 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
GDF9O60383 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.92■■□□□ 1.26
GDF9O60383 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.92■■□□□ 1.26
GDF9O60383 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
GDF9O60383 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
GDF9O60383 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
GDF9O60383 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
GDF9O60383 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
GDF9O60383 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
GDF9O60383 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.91■■□□□ 1.26
GDF9O60383 AC027682.1-201ENST00000562846 899 ntBASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms