Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHF1O43189 AC138932.3-201ENST00000567634 1902 ntBASIC19.98■□□□□ 0.79
PHF1O43189 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF1O43189 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.97■□□□□ 0.79
PHF1O43189 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PHF1O43189 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF1O43189 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.97■□□□□ 0.79
PHF1O43189 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.97■□□□□ 0.79
PHF1O43189 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF1O43189 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.97■□□□□ 0.79
PHF1O43189 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.97■□□□□ 0.79
PHF1O43189 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF1O43189 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PHF1O43189 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF1O43189 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHF1O43189 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHF1O43189 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.96■□□□□ 0.79
PHF1O43189 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHF1O43189 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PHF1O43189 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.96■□□□□ 0.79
PHF1O43189 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PHF1O43189 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.96■□□□□ 0.79
PHF1O43189 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF1O43189 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF1O43189 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.95■□□□□ 0.78
PHF1O43189 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF1O43189 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF1O43189 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF1O43189 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF1O43189 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PHF1O43189 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.94■□□□□ 0.78
PHF1O43189 AL139125.2-201ENST00000623134 1869 ntBASIC19.94■□□□□ 0.78
PHF1O43189 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.94■□□□□ 0.78
PHF1O43189 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF1O43189 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.94■□□□□ 0.78
PHF1O43189 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PHF1O43189 RPS2P7-201ENST00000447334 885 ntBASIC19.94■□□□□ 0.78
PHF1O43189 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.94■□□□□ 0.78
PHF1O43189 AC087393.1-201ENST00000582896 145 ntBASIC19.94■□□□□ 0.78
PHF1O43189 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PHF1O43189 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF1O43189 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF1O43189 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF1O43189 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF1O43189 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF1O43189 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.93■□□□□ 0.78
PHF1O43189 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF1O43189 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PHF1O43189 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF1O43189 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PHF1O43189 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.93■□□□□ 0.78
PHF1O43189 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF1O43189 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF1O43189 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHF1O43189 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.92■□□□□ 0.78
PHF1O43189 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF1O43189 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
PHF1O43189 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF1O43189 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.92■□□□□ 0.78
PHF1O43189 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHF1O43189 MIR638-201ENST00000385237 100 ntBASIC19.92■□□□□ 0.78
PHF1O43189 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.92■□□□□ 0.78
PHF1O43189 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.92■□□□□ 0.78
PHF1O43189 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.92■□□□□ 0.78
PHF1O43189 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PHF1O43189 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.92■□□□□ 0.78
PHF1O43189 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF1O43189 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PHF1O43189 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF1O43189 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PHF1O43189 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF1O43189 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PHF1O43189 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF1O43189 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF1O43189 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PHF1O43189 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.91■□□□□ 0.78
PHF1O43189 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PHF1O43189 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHF1O43189 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHF1O43189 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
PHF1O43189 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
PHF1O43189 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF1O43189 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHF1O43189 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF1O43189 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.9■□□□□ 0.78
PHF1O43189 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF1O43189 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF1O43189 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF1O43189 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHF1O43189 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PHF1O43189 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.89■□□□□ 0.78
PHF1O43189 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.89■□□□□ 0.78
PHF1O43189 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF1O43189 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF1O43189 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHF1O43189 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.89■□□□□ 0.77
PHF1O43189 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PHF1O43189 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.89■□□□□ 0.77
PHF1O43189 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
PHF1O43189 Z92544.1-202ENST00000571933 1220 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms