Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
NDUFS4O43181 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NDUFS4O43181 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
NDUFS4O43181 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.37■■□□□ 1.17
NDUFS4O43181 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDUFS4O43181 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
NDUFS4O43181 RARRES2P1-201ENST00000474487 481 ntBASIC22.37■■□□□ 1.17
NDUFS4O43181 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.37■■□□□ 1.17
NDUFS4O43181 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.37■■□□□ 1.17
NDUFS4O43181 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.37■■□□□ 1.17
NDUFS4O43181 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
NDUFS4O43181 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NDUFS4O43181 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NDUFS4O43181 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.36■■□□□ 1.17
NDUFS4O43181 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
NDUFS4O43181 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NDUFS4O43181 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NDUFS4O43181 AC011551.1-201ENST00000614101 683 ntBASIC22.36■■□□□ 1.17
NDUFS4O43181 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NDUFS4O43181 AC090877.2-201ENST00000558441 1738 ntBASIC22.36■■□□□ 1.17
NDUFS4O43181 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
NDUFS4O43181 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NDUFS4O43181 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NDUFS4O43181 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
NDUFS4O43181 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NDUFS4O43181 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.35■■□□□ 1.17
NDUFS4O43181 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.35■■□□□ 1.17
NDUFS4O43181 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.35■■□□□ 1.17
NDUFS4O43181 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NDUFS4O43181 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NDUFS4O43181 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NDUFS4O43181 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.34■■□□□ 1.17
NDUFS4O43181 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.34■■□□□ 1.17
NDUFS4O43181 AC120024.1-201ENST00000562672 995 ntBASIC22.34■■□□□ 1.17
NDUFS4O43181 AC103724.3-201ENST00000564481 992 ntBASIC22.34■■□□□ 1.17
NDUFS4O43181 THA1P-201ENST00000590384 1145 ntBASIC22.34■■□□□ 1.17
NDUFS4O43181 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.34■■□□□ 1.17
NDUFS4O43181 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NDUFS4O43181 AL139125.2-201ENST00000623134 1869 ntBASIC22.33■■□□□ 1.17
NDUFS4O43181 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NDUFS4O43181 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NDUFS4O43181 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.32■■□□□ 1.16
NDUFS4O43181 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NDUFS4O43181 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.32■■□□□ 1.16
NDUFS4O43181 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NDUFS4O43181 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NDUFS4O43181 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.32■■□□□ 1.16
NDUFS4O43181 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NDUFS4O43181 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
NDUFS4O43181 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NDUFS4O43181 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
NDUFS4O43181 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NDUFS4O43181 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
NDUFS4O43181 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.31■■□□□ 1.16
NDUFS4O43181 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NDUFS4O43181 KRT18P24-201ENST00000344739 1156 ntBASIC22.31■■□□□ 1.16
NDUFS4O43181 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.31■■□□□ 1.16
NDUFS4O43181 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.31■■□□□ 1.16
NDUFS4O43181 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
NDUFS4O43181 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.31■■□□□ 1.16
NDUFS4O43181 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NDUFS4O43181 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NDUFS4O43181 AL031848.2-201ENST00000607670 837 ntBASIC22.3■■□□□ 1.16
NDUFS4O43181 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.3■■□□□ 1.16
NDUFS4O43181 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NDUFS4O43181 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.3■■□□□ 1.16
NDUFS4O43181 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NDUFS4O43181 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS4O43181 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS4O43181 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS4O43181 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS4O43181 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS4O43181 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.29■■□□□ 1.16
NDUFS4O43181 AC135731.1-201ENST00000569415 2548 ntBASIC22.29■■□□□ 1.16
NDUFS4O43181 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS4O43181 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.29■■□□□ 1.16
NDUFS4O43181 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS4O43181 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS4O43181 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFS4O43181 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NDUFS4O43181 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NDUFS4O43181 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NDUFS4O43181 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.28■■□□□ 1.16
NDUFS4O43181 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NDUFS4O43181 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NDUFS4O43181 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
NDUFS4O43181 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NDUFS4O43181 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.27■■□□□ 1.16
NDUFS4O43181 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NDUFS4O43181 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
NDUFS4O43181 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NDUFS4O43181 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NDUFS4O43181 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
NDUFS4O43181 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NDUFS4O43181 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NDUFS4O43181 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.26■■□□□ 1.15
NDUFS4O43181 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NDUFS4O43181 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NDUFS4O43181 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NDUFS4O43181 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms