Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.057e-10■■■□□ 17.7
NKRFO15226 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.17e-10■■■□□ 17.7
NKRFO15226 SBNO2-207ENST00000590176 561 ntTSL 421.92■■□□□ 1.12e-6■■■□□ 17.6
NKRFO15226 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.92e-6■■■□□ 17.6
NKRFO15226 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.62e-6■■■□□ 17.6
NKRFO15226 SH3BP2-216ENST00000510193 407 ntTSL 314.78□□□□□ -0.047e-7■■■□□ 17.6
NKRFO15226 PAPD7-206ENST00000515721 603 ntTSL 332.57■■■□□ 2.81e-6■■■□□ 17.6
NKRFO15226 MTA1-209ENST00000469140 1666 ntTSL 526.22■■□□□ 1.792e-16■■■□□ 17.6
NKRFO15226 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.062e-6■■■□□ 17.6
NKRFO15226 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.995e-10■■■□□ 17.6
NKRFO15226 RFFL-211ENST00000584541 563 ntTSL 420.67■□□□□ 0.95e-10■■■□□ 17.6
NKRFO15226 AC004223.3-202ENST00000591723 676 ntTSL 519.24■□□□□ 0.675e-10■■■□□ 17.6
NKRFO15226 AC004223.3-203ENST00000592181 787 ntAPPRIS ALT2 TSL 517.31■□□□□ 0.365e-10■■■□□ 17.6
NKRFO15226 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.275e-10■■■□□ 17.6
NKRFO15226 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.135e-10■■■□□ 17.6
NKRFO15226 RFFL-212ENST00000584655 4039 ntTSL 2 BASIC11.57□□□□□ -0.565e-10■■■□□ 17.6
NKRFO15226 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.38e-8■■■□□ 17.6
NKRFO15226 GNAS-256ENST00000603546 573 ntTSL 531.8■■■□□ 2.683e-20■■■□□ 17.6
NKRFO15226 GNAS-233ENST00000476935 828 ntTSL 327.6■■■□□ 2.013e-20■■■□□ 17.6
NKRFO15226 PAN3-204ENST00000503791 2443 ntTSL 225.99■■□□□ 1.753e-8■■■□□ 17.6
NKRFO15226 GNAS-248ENST00000488652 953 ntTSL 524.74■■□□□ 1.553e-20■■■□□ 17.6
NKRFO15226 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.49■■□□□ 1.193e-8■■■□□ 17.6
NKRFO15226 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.143e-8■■■□□ 17.6
NKRFO15226 STAU2-208ENST00000520872 560 ntTSL 321.99■■□□□ 1.113e-8■■■□□ 17.6
NKRFO15226 TRAM1-202ENST00000518678 535 ntTSL 420.11■□□□□ 0.813e-8■■■□□ 17.6
NKRFO15226 TRAM1-203ENST00000520700 542 ntTSL 519.82■□□□□ 0.763e-8■■■□□ 17.6
NKRFO15226 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.61■□□□□ 0.733e-8■■■□□ 17.6
NKRFO15226 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.723e-8■■■□□ 17.6
NKRFO15226 TRAM1-204ENST00000521049 872 ntTSL 519.39■□□□□ 0.693e-8■■■□□ 17.6
NKRFO15226 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.42■□□□□ 0.383e-8■■■□□ 17.6
NKRFO15226 STAU2-204ENST00000518767 1146 ntTSL 1 (best)16.97■□□□□ 0.313e-8■■■□□ 17.6
NKRFO15226 STAU2-228ENST00000524191 808 ntTSL 313.88□□□□□ -0.193e-8■■■□□ 17.6
NKRFO15226 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC13.65□□□□□ -0.223e-8■■■□□ 17.6
NKRFO15226 GNAS-209ENST00000371081 730 ntTSL 2 BASIC13.65□□□□□ -0.223e-20■■■□□ 17.6
NKRFO15226 STAU2-203ENST00000518502 687 ntTSL 313.65□□□□□ -0.223e-8■■■□□ 17.6
NKRFO15226 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.64□□□□□ -0.232e-7■■■□□ 17.6
NKRFO15226 GNAS-205ENST00000338783 641 ntTSL 313.22□□□□□ -0.293e-20■■■□□ 17.6
NKRFO15226 STAU2-214ENST00000521451 2712 ntTSL 1 (best) BASIC12.88□□□□□ -0.353e-8■■■□□ 17.6
NKRFO15226 STAU2-202ENST00000517542 1695 ntTSL 2 BASIC12.82□□□□□ -0.363e-8■■■□□ 17.6
NKRFO15226 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.52e-7■■■□□ 17.6
NKRFO15226 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC10.54□□□□□ -0.723e-8■■■□□ 17.6
NKRFO15226 GNAS-251ENST00000492907 790 ntTSL 39.84□□□□□ -0.833e-20■■■□□ 17.6
NKRFO15226 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC8.59□□□□□ -1.033e-8■■■□□ 17.6
NKRFO15226 STAU2-216ENST00000521736 550 ntTSL 57.75□□□□□ -1.173e-8■■■□□ 17.6
NKRFO15226 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.28□□□□□ -1.243e-8■■■□□ 17.6
NKRFO15226 STAU2-205ENST00000518981 1746 ntTSL 27.01□□□□□ -1.293e-8■■■□□ 17.6
NKRFO15226 STAU2-218ENST00000522061 564 ntTSL 46.63□□□□□ -1.353e-8■■■□□ 17.6
NKRFO15226 STAU2-206ENST00000519818 590 ntTSL 46.57□□□□□ -1.363e-8■■■□□ 17.6
NKRFO15226 STAU2-213ENST00000521447 727 ntTSL 56.26□□□□□ -1.413e-8■■■□□ 17.6
NKRFO15226 STAU2-222ENST00000522962 1041 ntTSL 36.23□□□□□ -1.413e-8■■■□□ 17.6
NKRFO15226 STAU2-227ENST00000524113 658 ntTSL 25.86□□□□□ -1.473e-8■■■□□ 17.6
NKRFO15226 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.8□□□□□ -1.483e-20■■■□□ 17.6
NKRFO15226 STAU2-217ENST00000521845 546 ntTSL 55.36□□□□□ -1.553e-8■■■□□ 17.6
NKRFO15226 STAU2-223ENST00000523160 227 ntTSL 35.08□□□□□ -1.63e-8■■■□□ 17.6
NKRFO15226 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.7□□□□□ -1.663e-8■■■□□ 17.6
NKRFO15226 STAU2-211ENST00000521293 552 ntTSL 44.57□□□□□ -1.683e-8■■■□□ 17.6
NKRFO15226 STAU2-209ENST00000520945 472 ntTSL 43.91□□□□□ -1.783e-8■■■□□ 17.6
NKRFO15226 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.31□□□□□ -1.883e-8■■■□□ 17.6
NKRFO15226 KDM4B-210ENST00000592175 562 ntTSL 418.95■□□□□ 0.621e-6■■■□□ 17.5
NKRFO15226 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.28■■□□□ 1.483e-6■■■□□ 17.5
NKRFO15226 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.063e-6■■■□□ 17.5
NKRFO15226 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.74■□□□□ 0.593e-6■■■□□ 17.5
NKRFO15226 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.63■□□□□ 0.413e-6■■■□□ 17.5
NKRFO15226 AATK-202ENST00000374792 4938 ntTSL 220.3■□□□□ 0.841e-6■■■□□ 17.5
NKRFO15226 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.451e-6■■■□□ 17.5
NKRFO15226 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.935e-6■■■□□ 17.5
NKRFO15226 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC10.27□□□□□ -0.775e-6■■■□□ 17.5
NKRFO15226 SEPT9-238ENST00000591472 555 ntTSL 413.62□□□□□ -0.232e-6■■■□□ 17.5
NKRFO15226 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.291e-6■■■□□ 17.5
NKRFO15226 SERPINE1-201ENST00000223095 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.482e-9■■■□□ 17.5
NKRFO15226 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.91■■□□□ 1.582e-6■■■□□ 17.5
NKRFO15226 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.94■■□□□ 1.422e-6■■■□□ 17.5
NKRFO15226 TBC1D22A-204ENST00000394449 2048 ntTSL 523.86■■□□□ 1.412e-6■■■□□ 17.5
NKRFO15226 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.7■□□□□ 0.422e-6■■■□□ 17.5
NKRFO15226 TBC1D22A-207ENST00000441162 2636 ntTSL 215.26■□□□□ 0.032e-6■■■□□ 17.5
NKRFO15226 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.022e-6■■■□□ 17.5
NKRFO15226 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC14.4□□□□□ -0.12e-6■■■□□ 17.5
NKRFO15226 SEPT9-245ENST00000592481 1291 ntTSL 523.43■■□□□ 1.348e-7■■■□□ 17.5
NKRFO15226 MRPS6-202ENST00000477091 1061 ntTSL 520.28■□□□□ 0.842e-16■■■□□ 17.5
NKRFO15226 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.532e-16■■■□□ 17.5
NKRFO15226 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.89■□□□□ 0.452e-16■■■□□ 17.5
NKRFO15226 MRPS6-205ENST00000488492 909 ntTSL 57.1□□□□□ -1.272e-16■■■□□ 17.5
NKRFO15226 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.812e-16■■■□□ 17.5
NKRFO15226 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.686e-9■■■□□ 17.5
NKRFO15226 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.89■■□□□ 1.093e-7■■■□□ 17.4
NKRFO15226 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.63■■□□□ 1.053e-7■■■□□ 17.4
NKRFO15226 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.793e-7■■■□□ 17.4
NKRFO15226 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.133e-7■■■□□ 17.4
NKRFO15226 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC9.57□□□□□ -0.883e-9■■■□□ 17.4
NKRFO15226 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.533e-9■■■□□ 17.4
NKRFO15226 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.978e-7■■■□□ 17.4
NKRFO15226 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC13.46□□□□□ -0.251e-6■■■□□ 17.4
NKRFO15226 SRC-211ENST00000497734 446 ntTSL 1 (best)14.52□□□□□ -0.091e-6■■■□□ 17.4
NKRFO15226 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.88■□□□□ 0.932e-11■■■□□ 17.4
NKRFO15226 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.27■□□□□ 0.682e-11■■■□□ 17.4
NKRFO15226 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.13■□□□□ 0.652e-11■■■□□ 17.4
NKRFO15226 RPL28-211ENST00000560881 1692 ntTSL 518.99■□□□□ 0.632e-11■■■□□ 17.4
NKRFO15226 MIR6805-201ENST00000615055 62 ntBASIC17.99■□□□□ 0.472e-11■■■□□ 17.4
NKRFO15226 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.67■□□□□ 0.422e-11■■■□□ 17.4
NKRFO15226 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.332e-11■■■□□ 17.4
Retrieved 100 of 9,198 protein–RNA pairs in 74.8 ms