Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
PIK3C2AO00443 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
PIK3C2AO00443 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC31.89■■■□□ 2.7
PIK3C2AO00443 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
PIK3C2AO00443 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.88■■■□□ 2.69
PIK3C2AO00443 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PIK3C2AO00443 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC31.88■■■□□ 2.69
PIK3C2AO00443 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
PIK3C2AO00443 AC097639.1-201ENST00000565519 1891 ntBASIC31.87■■■□□ 2.69
PIK3C2AO00443 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PIK3C2AO00443 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PIK3C2AO00443 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC31.87■■■□□ 2.69
PIK3C2AO00443 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
PIK3C2AO00443 AC010501.1-201ENST00000606270 1962 ntBASIC31.86■■■□□ 2.69
PIK3C2AO00443 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
PIK3C2AO00443 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
PIK3C2AO00443 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.86■■■□□ 2.69
PIK3C2AO00443 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
PIK3C2AO00443 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PIK3C2AO00443 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PIK3C2AO00443 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PIK3C2AO00443 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PIK3C2AO00443 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PIK3C2AO00443 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC31.84■■■□□ 2.69
PIK3C2AO00443 AC133561.4-201ENST00000566112 224 ntBASIC31.84■■■□□ 2.69
PIK3C2AO00443 AL031432.3-201ENST00000607698 485 ntBASIC31.84■■■□□ 2.69
PIK3C2AO00443 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PIK3C2AO00443 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PIK3C2AO00443 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
PIK3C2AO00443 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PIK3C2AO00443 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PIK3C2AO00443 AC106739.1-201ENST00000617035 715 ntBASIC31.83■■■□□ 2.69
PIK3C2AO00443 MIR6722-201ENST00000617286 78 ntBASIC31.83■■■□□ 2.69
PIK3C2AO00443 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.82■■■□□ 2.68
PIK3C2AO00443 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.82■■■□□ 2.68
PIK3C2AO00443 GUK1-205ENST00000366722 850 ntTSL 3 BASIC31.82■■■□□ 2.68
PIK3C2AO00443 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PIK3C2AO00443 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC31.82■■■□□ 2.68
PIK3C2AO00443 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.82■■■□□ 2.68
PIK3C2AO00443 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
PIK3C2AO00443 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.81■■■□□ 2.68
PIK3C2AO00443 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC31.81■■■□□ 2.68
PIK3C2AO00443 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PIK3C2AO00443 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.8■■■□□ 2.68
PIK3C2AO00443 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PIK3C2AO00443 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC31.8■■■□□ 2.68
PIK3C2AO00443 AC005837.3-201ENST00000612163 286 ntBASIC31.8■■■□□ 2.68
PIK3C2AO00443 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
PIK3C2AO00443 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.8■■■□□ 2.68
PIK3C2AO00443 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.8■■■□□ 2.68
PIK3C2AO00443 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.79■■■□□ 2.68
PIK3C2AO00443 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PIK3C2AO00443 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PIK3C2AO00443 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PIK3C2AO00443 ZNRF2P3-201ENST00000424200 374 ntBASIC31.79■■■□□ 2.68
PIK3C2AO00443 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.79■■■□□ 2.68
PIK3C2AO00443 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
PIK3C2AO00443 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PIK3C2AO00443 SUDS3P1-201ENST00000505831 966 ntBASIC31.77■■■□□ 2.68
PIK3C2AO00443 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.77■■■□□ 2.68
PIK3C2AO00443 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PIK3C2AO00443 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.77■■■□□ 2.68
PIK3C2AO00443 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
PIK3C2AO00443 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
PIK3C2AO00443 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
PIK3C2AO00443 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
PIK3C2AO00443 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PIK3C2AO00443 RARRES2P6-201ENST00000567333 442 ntBASIC31.76■■■□□ 2.67
PIK3C2AO00443 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.74■■■□□ 2.67
PIK3C2AO00443 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC31.74■■■□□ 2.67
PIK3C2AO00443 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.74■■■□□ 2.67
PIK3C2AO00443 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PIK3C2AO00443 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PIK3C2AO00443 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
PIK3C2AO00443 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PIK3C2AO00443 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PIK3C2AO00443 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.73■■■□□ 2.67
PIK3C2AO00443 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PIK3C2AO00443 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PIK3C2AO00443 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
PIK3C2AO00443 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.71■■■□□ 2.67
PIK3C2AO00443 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC31.71■■■□□ 2.67
PIK3C2AO00443 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
PIK3C2AO00443 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PIK3C2AO00443 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
PIK3C2AO00443 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.7■■■□□ 2.66
PIK3C2AO00443 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.7■■■□□ 2.66
PIK3C2AO00443 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PIK3C2AO00443 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
PIK3C2AO00443 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PIK3C2AO00443 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
PIK3C2AO00443 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.69■■■□□ 2.66
PIK3C2AO00443 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.69■■■□□ 2.66
PIK3C2AO00443 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PIK3C2AO00443 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PIK3C2AO00443 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PIK3C2AO00443 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.68■■■□□ 2.66
PIK3C2AO00443 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.68■■■□□ 2.66
PIK3C2AO00443 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
PIK3C2AO00443 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms