Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.65■■□□□ 1.38
UPK3BL1B0FP48 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPK3BL1B0FP48 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
UPK3BL1B0FP48 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UPK3BL1B0FP48 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.64■■□□□ 1.38
UPK3BL1B0FP48 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UPK3BL1B0FP48 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UPK3BL1B0FP48 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.64■■□□□ 1.37
UPK3BL1B0FP48 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.64■■□□□ 1.37
UPK3BL1B0FP48 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.64■■□□□ 1.37
UPK3BL1B0FP48 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
UPK3BL1B0FP48 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
UPK3BL1B0FP48 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
UPK3BL1B0FP48 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
UPK3BL1B0FP48 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
UPK3BL1B0FP48 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
UPK3BL1B0FP48 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
UPK3BL1B0FP48 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.62■■□□□ 1.37
UPK3BL1B0FP48 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.62■■□□□ 1.37
UPK3BL1B0FP48 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
UPK3BL1B0FP48 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
UPK3BL1B0FP48 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.62■■□□□ 1.37
UPK3BL1B0FP48 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
UPK3BL1B0FP48 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.61■■□□□ 1.37
UPK3BL1B0FP48 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.61■■□□□ 1.37
UPK3BL1B0FP48 AC131281.2-201ENST00000520478 145 ntBASIC23.61■■□□□ 1.37
UPK3BL1B0FP48 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.61■■□□□ 1.37
UPK3BL1B0FP48 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
UPK3BL1B0FP48 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.6■■□□□ 1.37
UPK3BL1B0FP48 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.6■■□□□ 1.37
UPK3BL1B0FP48 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
UPK3BL1B0FP48 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
UPK3BL1B0FP48 MIR4281-201ENST00000580852 62 ntBASIC23.6■■□□□ 1.37
UPK3BL1B0FP48 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.6■■□□□ 1.37
UPK3BL1B0FP48 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
UPK3BL1B0FP48 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
UPK3BL1B0FP48 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
UPK3BL1B0FP48 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.6■■□□□ 1.37
UPK3BL1B0FP48 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.59■■□□□ 1.37
UPK3BL1B0FP48 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
UPK3BL1B0FP48 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.59■■□□□ 1.37
UPK3BL1B0FP48 TSPY9P-201ENST00000440215 945 ntBASIC23.59■■□□□ 1.37
UPK3BL1B0FP48 TSPY11P-201ENST00000442607 1045 ntBASIC23.59■■□□□ 1.37
UPK3BL1B0FP48 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.59■■□□□ 1.37
UPK3BL1B0FP48 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.59■■□□□ 1.37
UPK3BL1B0FP48 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
UPK3BL1B0FP48 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.58■■□□□ 1.37
UPK3BL1B0FP48 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
UPK3BL1B0FP48 AC092028.1-203ENST00000608262 953 ntBASIC23.58■■□□□ 1.37
UPK3BL1B0FP48 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
UPK3BL1B0FP48 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.58■■□□□ 1.36
UPK3BL1B0FP48 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.58■■□□□ 1.36
UPK3BL1B0FP48 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.57■■□□□ 1.36
UPK3BL1B0FP48 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
UPK3BL1B0FP48 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
UPK3BL1B0FP48 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.57■■□□□ 1.36
UPK3BL1B0FP48 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.57■■□□□ 1.36
UPK3BL1B0FP48 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UPK3BL1B0FP48 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
UPK3BL1B0FP48 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
UPK3BL1B0FP48 SLC6A10P-202ENST00000431994 2058 ntBASIC23.56■■□□□ 1.36
UPK3BL1B0FP48 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
UPK3BL1B0FP48 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UPK3BL1B0FP48 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.56■■□□□ 1.36
UPK3BL1B0FP48 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.56■■□□□ 1.36
UPK3BL1B0FP48 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.56■■□□□ 1.36
UPK3BL1B0FP48 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
UPK3BL1B0FP48 AC090877.2-201ENST00000558441 1738 ntBASIC23.56■■□□□ 1.36
UPK3BL1B0FP48 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
UPK3BL1B0FP48 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
UPK3BL1B0FP48 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.55■■□□□ 1.36
UPK3BL1B0FP48 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.55■■□□□ 1.36
UPK3BL1B0FP48 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.55■■□□□ 1.36
UPK3BL1B0FP48 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
UPK3BL1B0FP48 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
UPK3BL1B0FP48 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
UPK3BL1B0FP48 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.54■■□□□ 1.36
UPK3BL1B0FP48 AL136116.3-201ENST00000402907 1138 ntBASIC23.54■■□□□ 1.36
UPK3BL1B0FP48 AC133561.4-201ENST00000566112 224 ntBASIC23.54■■□□□ 1.36
UPK3BL1B0FP48 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
UPK3BL1B0FP48 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.53■■□□□ 1.36
UPK3BL1B0FP48 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.53■■□□□ 1.36
UPK3BL1B0FP48 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
UPK3BL1B0FP48 AC005837.3-201ENST00000612163 286 ntBASIC23.53■■□□□ 1.36
UPK3BL1B0FP48 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
UPK3BL1B0FP48 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
UPK3BL1B0FP48 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
UPK3BL1B0FP48 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
UPK3BL1B0FP48 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
UPK3BL1B0FP48 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
UPK3BL1B0FP48 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
UPK3BL1B0FP48 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
UPK3BL1B0FP48 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
UPK3BL1B0FP48 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.52■■□□□ 1.36
UPK3BL1B0FP48 AC110285.6-201ENST00000617652 491 ntBASIC23.52■■□□□ 1.36
UPK3BL1B0FP48 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
UPK3BL1B0FP48 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.52■■□□□ 1.36
UPK3BL1B0FP48 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UPK3BL1B0FP48 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
UPK3BL1B0FP48 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms