Protein–RNA interactions for Protein: A6NKF1

SAC3D1, SAC3 domain-containing protein 1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAC3D1A6NKF1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SAC3D1A6NKF1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.81■■□□□ 1.08
SAC3D1A6NKF1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SAC3D1A6NKF1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SAC3D1A6NKF1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SAC3D1A6NKF1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SAC3D1A6NKF1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.8■■□□□ 1.08
SAC3D1A6NKF1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SAC3D1A6NKF1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SAC3D1A6NKF1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SAC3D1A6NKF1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.8■■□□□ 1.08
SAC3D1A6NKF1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.79■■□□□ 1.08
SAC3D1A6NKF1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SAC3D1A6NKF1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SAC3D1A6NKF1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SAC3D1A6NKF1 EP400NL-214ENST00000641289 2402 ntBASIC21.78■■□□□ 1.08
SAC3D1A6NKF1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SAC3D1A6NKF1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SAC3D1A6NKF1 MIR6089-201ENST00000616698 64 ntBASIC21.78■■□□□ 1.08
SAC3D1A6NKF1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SAC3D1A6NKF1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
SAC3D1A6NKF1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SAC3D1A6NKF1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SAC3D1A6NKF1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.77■■□□□ 1.08
SAC3D1A6NKF1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SAC3D1A6NKF1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SAC3D1A6NKF1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SAC3D1A6NKF1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SAC3D1A6NKF1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SAC3D1A6NKF1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.77■■□□□ 1.08
SAC3D1A6NKF1 AP006261.1-201ENST00000584783 668 ntBASIC21.77■■□□□ 1.08
SAC3D1A6NKF1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SAC3D1A6NKF1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SAC3D1A6NKF1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SAC3D1A6NKF1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SAC3D1A6NKF1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SAC3D1A6NKF1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SAC3D1A6NKF1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SAC3D1A6NKF1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SAC3D1A6NKF1 AC233723.2-201ENST00000623798 2106 ntBASIC21.76■■□□□ 1.07
SAC3D1A6NKF1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.76■■□□□ 1.07
SAC3D1A6NKF1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SAC3D1A6NKF1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.76■■□□□ 1.07
SAC3D1A6NKF1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SAC3D1A6NKF1 AC044849.2-201ENST00000606596 710 ntBASIC21.76■■□□□ 1.07
SAC3D1A6NKF1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SAC3D1A6NKF1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SAC3D1A6NKF1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 AC148477.6-201ENST00000623746 465 ntBASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 LINC00565-201ENST00000562710 2331 ntBASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SAC3D1A6NKF1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SAC3D1A6NKF1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SAC3D1A6NKF1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SAC3D1A6NKF1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SAC3D1A6NKF1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SAC3D1A6NKF1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SAC3D1A6NKF1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SAC3D1A6NKF1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SAC3D1A6NKF1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SAC3D1A6NKF1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.73■■□□□ 1.07
SAC3D1A6NKF1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SAC3D1A6NKF1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SAC3D1A6NKF1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SAC3D1A6NKF1 DUX4L29-201ENST00000425409 679 ntBASIC21.73■■□□□ 1.07
SAC3D1A6NKF1 AC008813.1-201ENST00000536597 885 ntBASIC21.73■■□□□ 1.07
SAC3D1A6NKF1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.73■■□□□ 1.07
SAC3D1A6NKF1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SAC3D1A6NKF1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.73■■□□□ 1.07
SAC3D1A6NKF1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SAC3D1A6NKF1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SAC3D1A6NKF1 HLA-L-211ENST00000482052 1765 ntBASIC21.72■■□□□ 1.07
SAC3D1A6NKF1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SAC3D1A6NKF1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SAC3D1A6NKF1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms