Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 AC110285.7-201ENST00000624417 1536 ntBASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RBFOX3A6NFN3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RBFOX3A6NFN3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
RBFOX3A6NFN3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RBFOX3A6NFN3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RBFOX3A6NFN3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RBFOX3A6NFN3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RBFOX3A6NFN3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RBFOX3A6NFN3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.39■□□□□ 0.53
RBFOX3A6NFN3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RBFOX3A6NFN3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RBFOX3A6NFN3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RBFOX3A6NFN3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RBFOX3A6NFN3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RBFOX3A6NFN3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RBFOX3A6NFN3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.38■□□□□ 0.53
RBFOX3A6NFN3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
RBFOX3A6NFN3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RBFOX3A6NFN3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RBFOX3A6NFN3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RBFOX3A6NFN3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 AC007375.3-201ENST00000600936 2314 ntBASIC18.37■□□□□ 0.53
RBFOX3A6NFN3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
RBFOX3A6NFN3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RBFOX3A6NFN3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.36■□□□□ 0.53
RBFOX3A6NFN3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RBFOX3A6NFN3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.36■□□□□ 0.53
RBFOX3A6NFN3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RBFOX3A6NFN3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.36■□□□□ 0.53
RBFOX3A6NFN3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.35■□□□□ 0.53
RBFOX3A6NFN3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RBFOX3A6NFN3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RBFOX3A6NFN3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RBFOX3A6NFN3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.35■□□□□ 0.53
RBFOX3A6NFN3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RBFOX3A6NFN3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RBFOX3A6NFN3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RBFOX3A6NFN3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RBFOX3A6NFN3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RBFOX3A6NFN3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RBFOX3A6NFN3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 AL391121.1-201ENST00000607967 1349 ntBASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
RBFOX3A6NFN3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.33■□□□□ 0.53
RBFOX3A6NFN3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RBFOX3A6NFN3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RBFOX3A6NFN3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RBFOX3A6NFN3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.33■□□□□ 0.53
RBFOX3A6NFN3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.33■□□□□ 0.53
RBFOX3A6NFN3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RBFOX3A6NFN3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RBFOX3A6NFN3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RBFOX3A6NFN3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RBFOX3A6NFN3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RBFOX3A6NFN3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RBFOX3A6NFN3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.32■□□□□ 0.52
RBFOX3A6NFN3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RBFOX3A6NFN3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.32■□□□□ 0.52
RBFOX3A6NFN3 SLC25A24-204ENST00000569674 2357 ntBASIC18.32■□□□□ 0.52
RBFOX3A6NFN3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RBFOX3A6NFN3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RBFOX3A6NFN3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.32■□□□□ 0.52
RBFOX3A6NFN3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RBFOX3A6NFN3 GUSBP5-202ENST00000510805 1989 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms