Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC36.54■■■■□ 3.44
PLEKHD1A6NEE1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
PLEKHD1A6NEE1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
PLEKHD1A6NEE1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
PLEKHD1A6NEE1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC36.53■■■■□ 3.44
PLEKHD1A6NEE1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
PLEKHD1A6NEE1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
PLEKHD1A6NEE1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC36.53■■■■□ 3.44
PLEKHD1A6NEE1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
PLEKHD1A6NEE1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
PLEKHD1A6NEE1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC36.52■■■■□ 3.44
PLEKHD1A6NEE1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
PLEKHD1A6NEE1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
PLEKHD1A6NEE1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
PLEKHD1A6NEE1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC36.51■■■■□ 3.44
PLEKHD1A6NEE1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC36.51■■■■□ 3.44
PLEKHD1A6NEE1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC36.51■■■■□ 3.44
PLEKHD1A6NEE1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC36.51■■■■□ 3.44
PLEKHD1A6NEE1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
PLEKHD1A6NEE1 MIR5787-201ENST00000611784 55 ntBASIC36.51■■■■□ 3.44
PLEKHD1A6NEE1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC36.51■■■■□ 3.43
PLEKHD1A6NEE1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
PLEKHD1A6NEE1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC36.5■■■■□ 3.43
PLEKHD1A6NEE1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
PLEKHD1A6NEE1 AL136967.2-201ENST00000623968 743 ntBASIC36.5■■■■□ 3.43
PLEKHD1A6NEE1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC36.5■■■■□ 3.43
PLEKHD1A6NEE1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC36.5■■■■□ 3.43
PLEKHD1A6NEE1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
PLEKHD1A6NEE1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC36.49■■■■□ 3.43
PLEKHD1A6NEE1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
PLEKHD1A6NEE1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC36.49■■■■□ 3.43
PLEKHD1A6NEE1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC36.49■■■■□ 3.43
PLEKHD1A6NEE1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC36.49■■■■□ 3.43
PLEKHD1A6NEE1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
PLEKHD1A6NEE1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
PLEKHD1A6NEE1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
PLEKHD1A6NEE1 AC104564.3-201ENST00000582367 638 ntBASIC36.48■■■■□ 3.43
PLEKHD1A6NEE1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC36.48■■■■□ 3.43
PLEKHD1A6NEE1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC36.48■■■■□ 3.43
PLEKHD1A6NEE1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC36.47■■■■□ 3.43
PLEKHD1A6NEE1 AC105265.2-201ENST00000467189 838 ntBASIC36.47■■■■□ 3.43
PLEKHD1A6NEE1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC36.47■■■■□ 3.43
PLEKHD1A6NEE1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC36.47■■■■□ 3.43
PLEKHD1A6NEE1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
PLEKHD1A6NEE1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
PLEKHD1A6NEE1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
PLEKHD1A6NEE1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
PLEKHD1A6NEE1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC36.46■■■■□ 3.43
PLEKHD1A6NEE1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC36.45■■■■□ 3.43
PLEKHD1A6NEE1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC36.45■■■■□ 3.43
PLEKHD1A6NEE1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC36.45■■■■□ 3.43
PLEKHD1A6NEE1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC36.44■■■■□ 3.42
PLEKHD1A6NEE1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
PLEKHD1A6NEE1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
PLEKHD1A6NEE1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC36.43■■■■□ 3.42
PLEKHD1A6NEE1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC36.43■■■■□ 3.42
PLEKHD1A6NEE1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC36.43■■■■□ 3.42
PLEKHD1A6NEE1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC36.43■■■■□ 3.42
PLEKHD1A6NEE1 AC142086.6-201ENST00000621154 1765 ntBASIC36.43■■■■□ 3.42
PLEKHD1A6NEE1 AF213884.3-201ENST00000563833 479 ntBASIC36.42■■■■□ 3.42
PLEKHD1A6NEE1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
PLEKHD1A6NEE1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
PLEKHD1A6NEE1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
PLEKHD1A6NEE1 MIR939-201ENST00000401314 82 ntBASIC36.41■■■■□ 3.42
PLEKHD1A6NEE1 GRAMD4P4-201ENST00000613563 1115 ntBASIC36.41■■■■□ 3.42
PLEKHD1A6NEE1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
PLEKHD1A6NEE1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
PLEKHD1A6NEE1 AC004448.1-201ENST00000458332 883 ntBASIC36.4■■■■□ 3.42
PLEKHD1A6NEE1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC36.39■■■■□ 3.42
PLEKHD1A6NEE1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC36.39■■■■□ 3.42
PLEKHD1A6NEE1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
PLEKHD1A6NEE1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC36.39■■■■□ 3.42
PLEKHD1A6NEE1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC36.38■■■■□ 3.41
PLEKHD1A6NEE1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
PLEKHD1A6NEE1 DUX4L19-201ENST00000557448 1267 ntBASIC36.38■■■■□ 3.41
PLEKHD1A6NEE1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
PLEKHD1A6NEE1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC36.38■■■■□ 3.41
PLEKHD1A6NEE1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC36.37■■■■□ 3.41
PLEKHD1A6NEE1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
PLEKHD1A6NEE1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC36.37■■■■□ 3.41
PLEKHD1A6NEE1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC36.37■■■■□ 3.41
PLEKHD1A6NEE1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC36.37■■■■□ 3.41
PLEKHD1A6NEE1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
PLEKHD1A6NEE1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC36.37■■■■□ 3.41
PLEKHD1A6NEE1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC36.36■■■■□ 3.41
PLEKHD1A6NEE1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
PLEKHD1A6NEE1 AP001330.3-201ENST00000520123 633 ntBASIC36.36■■■■□ 3.41
PLEKHD1A6NEE1 SF1-220ENST00000626028 704 ntTSL 2 BASIC36.36■■■■□ 3.41
PLEKHD1A6NEE1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC36.36■■■■□ 3.41
PLEKHD1A6NEE1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC36.36■■■■□ 3.41
PLEKHD1A6NEE1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC36.35■■■■□ 3.41
PLEKHD1A6NEE1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC36.34■■■■□ 3.41
PLEKHD1A6NEE1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC36.34■■■■□ 3.41
PLEKHD1A6NEE1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC36.34■■■■□ 3.41
PLEKHD1A6NEE1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC36.34■■■■□ 3.41
PLEKHD1A6NEE1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC36.34■■■■□ 3.41
PLEKHD1A6NEE1 AC097639.1-201ENST00000565519 1891 ntBASIC36.34■■■■□ 3.41
PLEKHD1A6NEE1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC36.33■■■■□ 3.41
PLEKHD1A6NEE1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
PLEKHD1A6NEE1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC36.33■■■■□ 3.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms