Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H12DA2A288 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H12DA2A288 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
ZC3H12DA2A288 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
ZC3H12DA2A288 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZC3H12DA2A288 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.29■■□□□ 1
ZC3H12DA2A288 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZC3H12DA2A288 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.29■■□□□ 1
ZC3H12DA2A288 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.28■■□□□ 1
ZC3H12DA2A288 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H12DA2A288 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.28■■□□□ 1
ZC3H12DA2A288 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZC3H12DA2A288 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H12DA2A288 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZC3H12DA2A288 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZC3H12DA2A288 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZC3H12DA2A288 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZC3H12DA2A288 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.27■■□□□ 1
ZC3H12DA2A288 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
ZC3H12DA2A288 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZC3H12DA2A288 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ZC3H12DA2A288 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H12DA2A288 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H12DA2A288 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H12DA2A288 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.26■□□□□ 0.99
ZC3H12DA2A288 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.26■□□□□ 0.99
ZC3H12DA2A288 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ZC3H12DA2A288 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZC3H12DA2A288 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.26■□□□□ 0.99
ZC3H12DA2A288 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H12DA2A288 AP003733.4-201ENST00000623785 1697 ntBASIC21.25■□□□□ 0.99
ZC3H12DA2A288 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.25■□□□□ 0.99
ZC3H12DA2A288 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.25■□□□□ 0.99
ZC3H12DA2A288 TSPY13P-201ENST00000338964 914 ntBASIC21.25■□□□□ 0.99
ZC3H12DA2A288 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H12DA2A288 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H12DA2A288 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.25■□□□□ 0.99
ZC3H12DA2A288 LONRF2P2-201ENST00000439212 571 ntBASIC21.25■□□□□ 0.99
ZC3H12DA2A288 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.25■□□□□ 0.99
ZC3H12DA2A288 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H12DA2A288 AC012354.3-201ENST00000623734 483 ntBASIC21.25■□□□□ 0.99
ZC3H12DA2A288 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZC3H12DA2A288 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H12DA2A288 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H12DA2A288 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H12DA2A288 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H12DA2A288 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H12DA2A288 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZC3H12DA2A288 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ZC3H12DA2A288 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.24■□□□□ 0.99
ZC3H12DA2A288 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H12DA2A288 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H12DA2A288 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H12DA2A288 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H12DA2A288 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H12DA2A288 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.23■□□□□ 0.99
ZC3H12DA2A288 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H12DA2A288 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.23■□□□□ 0.99
ZC3H12DA2A288 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H12DA2A288 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.23■□□□□ 0.99
ZC3H12DA2A288 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZC3H12DA2A288 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 AC139795.1-202ENST00000500444 432 ntBASIC21.22■□□□□ 0.99
ZC3H12DA2A288 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 AL033527.3-201ENST00000566366 1196 ntBASIC21.22■□□□□ 0.99
ZC3H12DA2A288 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZC3H12DA2A288 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ZC3H12DA2A288 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H12DA2A288 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H12DA2A288 MIR6089-201ENST00000616698 64 ntBASIC21.21■□□□□ 0.99
ZC3H12DA2A288 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ZC3H12DA2A288 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H12DA2A288 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZC3H12DA2A288 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H12DA2A288 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.21■□□□□ 0.99
ZC3H12DA2A288 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ZC3H12DA2A288 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H12DA2A288 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H12DA2A288 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.2■□□□□ 0.98
ZC3H12DA2A288 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZC3H12DA2A288 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
ZC3H12DA2A288 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.2■□□□□ 0.98
ZC3H12DA2A288 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.19■□□□□ 0.98
ZC3H12DA2A288 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ZC3H12DA2A288 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H12DA2A288 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ZC3H12DA2A288 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZC3H12DA2A288 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms