Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.21■■□□□ 1.95
CCDC196A0A1B0GTZ2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC196A0A1B0GTZ2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC196A0A1B0GTZ2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC196A0A1B0GTZ2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC196A0A1B0GTZ2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CCDC196A0A1B0GTZ2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
CCDC196A0A1B0GTZ2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CCDC196A0A1B0GTZ2 YBX1P4-201ENST00000392794 808 ntBASIC27.2■■□□□ 1.94
CCDC196A0A1B0GTZ2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC27.2■■□□□ 1.94
CCDC196A0A1B0GTZ2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.94
CCDC196A0A1B0GTZ2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CCDC196A0A1B0GTZ2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.2■■□□□ 1.94
CCDC196A0A1B0GTZ2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.2■■□□□ 1.94
CCDC196A0A1B0GTZ2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CCDC196A0A1B0GTZ2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CCDC196A0A1B0GTZ2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.19■■□□□ 1.94
CCDC196A0A1B0GTZ2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC196A0A1B0GTZ2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC196A0A1B0GTZ2 KRT18P24-201ENST00000344739 1156 ntBASIC27.19■■□□□ 1.94
CCDC196A0A1B0GTZ2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.19■■□□□ 1.94
CCDC196A0A1B0GTZ2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC196A0A1B0GTZ2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CCDC196A0A1B0GTZ2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.19■■□□□ 1.94
CCDC196A0A1B0GTZ2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
CCDC196A0A1B0GTZ2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC27.18■■□□□ 1.94
CCDC196A0A1B0GTZ2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC196A0A1B0GTZ2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC196A0A1B0GTZ2 AC103834.1-201ENST00000520383 144 ntBASIC27.18■■□□□ 1.94
CCDC196A0A1B0GTZ2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CCDC196A0A1B0GTZ2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27.18■■□□□ 1.94
CCDC196A0A1B0GTZ2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
CCDC196A0A1B0GTZ2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CCDC196A0A1B0GTZ2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.17■■□□□ 1.94
CCDC196A0A1B0GTZ2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.17■■□□□ 1.94
CCDC196A0A1B0GTZ2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC27.17■■□□□ 1.94
CCDC196A0A1B0GTZ2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
CCDC196A0A1B0GTZ2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC196A0A1B0GTZ2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CCDC196A0A1B0GTZ2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 AL139125.2-201ENST00000623134 1869 ntBASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 AC120024.1-201ENST00000562672 995 ntBASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 KRT8P33-201ENST00000508125 1423 ntBASIC27.15■■□□□ 1.94
CCDC196A0A1B0GTZ2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CCDC196A0A1B0GTZ2 THA1P-201ENST00000590384 1145 ntBASIC27.14■■□□□ 1.94
CCDC196A0A1B0GTZ2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.14■■□□□ 1.94
CCDC196A0A1B0GTZ2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CCDC196A0A1B0GTZ2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC196A0A1B0GTZ2 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.13■■□□□ 1.93
CCDC196A0A1B0GTZ2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CCDC196A0A1B0GTZ2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC196A0A1B0GTZ2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.12■■□□□ 1.93
CCDC196A0A1B0GTZ2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.12■■□□□ 1.93
CCDC196A0A1B0GTZ2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCDC196A0A1B0GTZ2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC196A0A1B0GTZ2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC196A0A1B0GTZ2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC196A0A1B0GTZ2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.11■■□□□ 1.93
CCDC196A0A1B0GTZ2 HLA-L-211ENST00000482052 1765 ntBASIC27.11■■□□□ 1.93
CCDC196A0A1B0GTZ2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCDC196A0A1B0GTZ2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.1■■□□□ 1.93
CCDC196A0A1B0GTZ2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC27.1■■□□□ 1.93
CCDC196A0A1B0GTZ2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC196A0A1B0GTZ2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.1■■□□□ 1.93
CCDC196A0A1B0GTZ2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC27.1■■□□□ 1.93
CCDC196A0A1B0GTZ2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC196A0A1B0GTZ2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.1■■□□□ 1.93
CCDC196A0A1B0GTZ2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC196A0A1B0GTZ2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC196A0A1B0GTZ2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC196A0A1B0GTZ2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC196A0A1B0GTZ2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.09■■□□□ 1.93
CCDC196A0A1B0GTZ2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.09■■□□□ 1.93
CCDC196A0A1B0GTZ2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC196A0A1B0GTZ2 AC103724.3-201ENST00000564481 992 ntBASIC27.09■■□□□ 1.93
CCDC196A0A1B0GTZ2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
CCDC196A0A1B0GTZ2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC196A0A1B0GTZ2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC196A0A1B0GTZ2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC196A0A1B0GTZ2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC196A0A1B0GTZ2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC196A0A1B0GTZ2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC196A0A1B0GTZ2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC196A0A1B0GTZ2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC196A0A1B0GTZ2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC196A0A1B0GTZ2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC27.07■■□□□ 1.92
CCDC196A0A1B0GTZ2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC196A0A1B0GTZ2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
CCDC196A0A1B0GTZ2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCDC196A0A1B0GTZ2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms