Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 MIR639-201ENST00000384974 98 ntBASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV21A0A0B4J279 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV21A0A0B4J279 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
TRAV21A0A0B4J279 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV21A0A0B4J279 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV21A0A0B4J279 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAV21A0A0B4J279 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.27■□□□□ 0.35
TRAV21A0A0B4J279 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV21A0A0B4J279 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV21A0A0B4J279 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAV21A0A0B4J279 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV21A0A0B4J279 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV21A0A0B4J279 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV21A0A0B4J279 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV21A0A0B4J279 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV21A0A0B4J279 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.26■□□□□ 0.35
TRAV21A0A0B4J279 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV21A0A0B4J279 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV21A0A0B4J279 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV21A0A0B4J279 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV21A0A0B4J279 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV21A0A0B4J279 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV21A0A0B4J279 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV21A0A0B4J279 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRAV21A0A0B4J279 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV21A0A0B4J279 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV21A0A0B4J279 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV21A0A0B4J279 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV21A0A0B4J279 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV21A0A0B4J279 AC007029.1-201ENST00000604183 313 ntBASIC17.25■□□□□ 0.35
TRAV21A0A0B4J279 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV21A0A0B4J279 AC004812.2-201ENST00000611079 2094 ntBASIC17.25■□□□□ 0.35
TRAV21A0A0B4J279 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV21A0A0B4J279 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRAV21A0A0B4J279 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV21A0A0B4J279 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV21A0A0B4J279 FOXO3B-201ENST00000395675 1928 ntBASIC17.24■□□□□ 0.35
TRAV21A0A0B4J279 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV21A0A0B4J279 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV21A0A0B4J279 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV21A0A0B4J279 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV21A0A0B4J279 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV21A0A0B4J279 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV21A0A0B4J279 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV21A0A0B4J279 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRAV21A0A0B4J279 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAV21A0A0B4J279 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV21A0A0B4J279 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TRAV21A0A0B4J279 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV21A0A0B4J279 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV21A0A0B4J279 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV21A0A0B4J279 HLA-L-211ENST00000482052 1765 ntBASIC17.23■□□□□ 0.35
TRAV21A0A0B4J279 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV21A0A0B4J279 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV21A0A0B4J279 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV21A0A0B4J279 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV21A0A0B4J279 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV21A0A0B4J279 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV21A0A0B4J279 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV21A0A0B4J279 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.21■□□□□ 0.35
TRAV21A0A0B4J279 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV21A0A0B4J279 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV21A0A0B4J279 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV21A0A0B4J279 AC012676.1-201ENST00000574705 1949 ntBASIC17.21■□□□□ 0.35
TRAV21A0A0B4J279 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV21A0A0B4J279 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV21A0A0B4J279 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
TRAV21A0A0B4J279 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV21A0A0B4J279 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV21A0A0B4J279 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV21A0A0B4J279 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV21A0A0B4J279 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms