Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV34A0A0B4J273 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV34A0A0B4J273 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
TRAV34A0A0B4J273 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV34A0A0B4J273 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV34A0A0B4J273 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV34A0A0B4J273 AC008813.1-201ENST00000536597 885 ntBASIC17.91■□□□□ 0.46
TRAV34A0A0B4J273 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV34A0A0B4J273 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV34A0A0B4J273 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV34A0A0B4J273 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV34A0A0B4J273 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV34A0A0B4J273 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV34A0A0B4J273 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV34A0A0B4J273 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV34A0A0B4J273 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV34A0A0B4J273 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV34A0A0B4J273 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRAV34A0A0B4J273 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV34A0A0B4J273 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV34A0A0B4J273 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.9■□□□□ 0.46
TRAV34A0A0B4J273 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRAV34A0A0B4J273 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV34A0A0B4J273 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV34A0A0B4J273 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 AC148477.6-201ENST00000623746 465 ntBASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRAV34A0A0B4J273 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV34A0A0B4J273 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV34A0A0B4J273 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV34A0A0B4J273 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV34A0A0B4J273 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV34A0A0B4J273 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV34A0A0B4J273 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV34A0A0B4J273 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
TRAV34A0A0B4J273 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV34A0A0B4J273 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV34A0A0B4J273 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV34A0A0B4J273 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV34A0A0B4J273 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRAV34A0A0B4J273 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV34A0A0B4J273 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRAV34A0A0B4J273 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV34A0A0B4J273 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV34A0A0B4J273 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV34A0A0B4J273 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRAV34A0A0B4J273 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV34A0A0B4J273 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRAV34A0A0B4J273 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV34A0A0B4J273 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV34A0A0B4J273 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV34A0A0B4J273 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV34A0A0B4J273 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV34A0A0B4J273 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV34A0A0B4J273 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRAV34A0A0B4J273 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.84■□□□□ 0.45
TRAV34A0A0B4J273 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV34A0A0B4J273 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV34A0A0B4J273 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV34A0A0B4J273 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
TRAV34A0A0B4J273 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV34A0A0B4J273 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.83■□□□□ 0.45
TRAV34A0A0B4J273 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV34A0A0B4J273 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV34A0A0B4J273 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.83■□□□□ 0.45
TRAV34A0A0B4J273 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV34A0A0B4J273 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRAV34A0A0B4J273 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV34A0A0B4J273 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms