Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV3A0A0B4J244 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV3A0A0B4J244 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAV3A0A0B4J244 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV3A0A0B4J244 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV3A0A0B4J244 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV3A0A0B4J244 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV3A0A0B4J244 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV3A0A0B4J244 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV3A0A0B4J244 AC133552.2-201ENST00000619106 1032 ntBASIC18.77■□□□□ 0.6
TRAV3A0A0B4J244 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV3A0A0B4J244 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.77■□□□□ 0.59
TRAV3A0A0B4J244 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.77■□□□□ 0.59
TRAV3A0A0B4J244 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV3A0A0B4J244 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV3A0A0B4J244 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRAV3A0A0B4J244 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV3A0A0B4J244 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV3A0A0B4J244 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV3A0A0B4J244 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV3A0A0B4J244 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV3A0A0B4J244 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV3A0A0B4J244 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV3A0A0B4J244 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV3A0A0B4J244 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV3A0A0B4J244 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRAV3A0A0B4J244 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV3A0A0B4J244 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.75■□□□□ 0.59
TRAV3A0A0B4J244 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV3A0A0B4J244 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TRAV3A0A0B4J244 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV3A0A0B4J244 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV3A0A0B4J244 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV3A0A0B4J244 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAV3A0A0B4J244 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
TRAV3A0A0B4J244 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV3A0A0B4J244 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.74■□□□□ 0.59
TRAV3A0A0B4J244 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV3A0A0B4J244 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV3A0A0B4J244 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV3A0A0B4J244 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV3A0A0B4J244 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV3A0A0B4J244 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 KRT18P10-201ENST00000388836 1287 ntBASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAV3A0A0B4J244 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV3A0A0B4J244 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV3A0A0B4J244 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV3A0A0B4J244 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV3A0A0B4J244 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV3A0A0B4J244 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV3A0A0B4J244 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV3A0A0B4J244 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV3A0A0B4J244 AC133561.1-201ENST00000568600 2415 ntBASIC18.71■□□□□ 0.59
TRAV3A0A0B4J244 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV3A0A0B4J244 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV3A0A0B4J244 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV3A0A0B4J244 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV3A0A0B4J244 RNF126P1-201ENST00000567452 1320 ntBASIC18.71■□□□□ 0.59
TRAV3A0A0B4J244 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV3A0A0B4J244 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAV3A0A0B4J244 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV3A0A0B4J244 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV3A0A0B4J244 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV3A0A0B4J244 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV3A0A0B4J244 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV3A0A0B4J244 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV3A0A0B4J244 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV3A0A0B4J244 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV3A0A0B4J244 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV3A0A0B4J244 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV3A0A0B4J244 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRAV3A0A0B4J244 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRAV3A0A0B4J244 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms