Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV10A0A0B4J240 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 AF131216.4-201ENST00000638924 1588 ntBASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 AL356740.2-201ENST00000601559 647 ntBASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV10A0A0B4J240 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV10A0A0B4J240 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV10A0A0B4J240 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV10A0A0B4J240 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV10A0A0B4J240 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV10A0A0B4J240 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV10A0A0B4J240 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.46■□□□□ 0.23
TRAV10A0A0B4J240 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV10A0A0B4J240 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV10A0A0B4J240 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV10A0A0B4J240 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
TRAV10A0A0B4J240 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV10A0A0B4J240 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV10A0A0B4J240 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV10A0A0B4J240 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV10A0A0B4J240 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV10A0A0B4J240 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAV10A0A0B4J240 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.45■□□□□ 0.22
TRAV10A0A0B4J240 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV10A0A0B4J240 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV10A0A0B4J240 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV10A0A0B4J240 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV10A0A0B4J240 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV10A0A0B4J240 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV10A0A0B4J240 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV10A0A0B4J240 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV10A0A0B4J240 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV10A0A0B4J240 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV10A0A0B4J240 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV10A0A0B4J240 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV10A0A0B4J240 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV10A0A0B4J240 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV10A0A0B4J240 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV10A0A0B4J240 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV10A0A0B4J240 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.44■□□□□ 0.22
TRAV10A0A0B4J240 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
TRAV10A0A0B4J240 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV10A0A0B4J240 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRAV10A0A0B4J240 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV10A0A0B4J240 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV10A0A0B4J240 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV10A0A0B4J240 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV10A0A0B4J240 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRAV10A0A0B4J240 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV10A0A0B4J240 AL117332.1-201ENST00000622628 974 ntBASIC16.43■□□□□ 0.22
TRAV10A0A0B4J240 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV10A0A0B4J240 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV10A0A0B4J240 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV10A0A0B4J240 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV10A0A0B4J240 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV10A0A0B4J240 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV10A0A0B4J240 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.42■□□□□ 0.22
TRAV10A0A0B4J240 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV10A0A0B4J240 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
TRAV10A0A0B4J240 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV10A0A0B4J240 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV10A0A0B4J240 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV10A0A0B4J240 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV10A0A0B4J240 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV10A0A0B4J240 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 MIR3621-201ENST00000580529 85 ntBASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV10A0A0B4J240 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV10A0A0B4J240 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV10A0A0B4J240 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV10A0A0B4J240 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV10A0A0B4J240 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV10A0A0B4J240 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV10A0A0B4J240 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms