Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV8-2A0A0B4J237 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV8-2A0A0B4J237 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.67■□□□□ 0.42
TRAV8-2A0A0B4J237 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV8-2A0A0B4J237 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-2A0A0B4J237 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-2A0A0B4J237 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRAV8-2A0A0B4J237 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-2A0A0B4J237 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-2A0A0B4J237 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-2A0A0B4J237 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-2A0A0B4J237 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-2A0A0B4J237 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-2A0A0B4J237 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-2A0A0B4J237 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV8-2A0A0B4J237 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
TRAV8-2A0A0B4J237 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-2A0A0B4J237 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-2A0A0B4J237 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV8-2A0A0B4J237 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
TRAV8-2A0A0B4J237 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-2A0A0B4J237 HLA-L-211ENST00000482052 1765 ntBASIC17.64■□□□□ 0.41
TRAV8-2A0A0B4J237 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-2A0A0B4J237 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-2A0A0B4J237 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV8-2A0A0B4J237 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-2A0A0B4J237 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRAV8-2A0A0B4J237 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRAV8-2A0A0B4J237 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-2A0A0B4J237 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV8-2A0A0B4J237 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAV8-2A0A0B4J237 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-2A0A0B4J237 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRAV8-2A0A0B4J237 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-2A0A0B4J237 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-2A0A0B4J237 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV8-2A0A0B4J237 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 AC004812.2-201ENST00000611079 2094 ntBASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 AL592293.1-201ENST00000502889 1188 ntBASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-2A0A0B4J237 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRAV8-2A0A0B4J237 SPCS2P3-201ENST00000500401 656 ntBASIC17.61■□□□□ 0.41
TRAV8-2A0A0B4J237 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-2A0A0B4J237 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-2A0A0B4J237 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV8-2A0A0B4J237 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-2A0A0B4J237 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-2A0A0B4J237 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-2A0A0B4J237 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-2A0A0B4J237 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-2A0A0B4J237 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-2A0A0B4J237 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-2A0A0B4J237 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-2A0A0B4J237 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-2A0A0B4J237 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-2A0A0B4J237 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRAV8-2A0A0B4J237 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-2A0A0B4J237 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-2A0A0B4J237 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRAV8-2A0A0B4J237 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-2A0A0B4J237 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV8-2A0A0B4J237 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV8-2A0A0B4J237 RPS2P7-201ENST00000447334 885 ntBASIC17.59■□□□□ 0.41
TRAV8-2A0A0B4J237 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-2A0A0B4J237 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-2A0A0B4J237 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-2A0A0B4J237 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-2A0A0B4J237 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.58■□□□□ 0.41
TRAV8-2A0A0B4J237 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV8-2A0A0B4J237 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV8-2A0A0B4J237 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV8-2A0A0B4J237 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRAV8-2A0A0B4J237 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRAV8-2A0A0B4J237 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV8-2A0A0B4J237 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV8-2A0A0B4J237 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRAV8-2A0A0B4J237 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-2A0A0B4J237 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms