Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRAV19A0A0A6YYK7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRAV19A0A0A6YYK7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRAV19A0A0A6YYK7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRAV19A0A0A6YYK7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.31■■□□□ 1.48
TRAV19A0A0A6YYK7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.31■■□□□ 1.48
TRAV19A0A0A6YYK7 AL356740.2-201ENST00000601559 647 ntBASIC24.31■■□□□ 1.48
TRAV19A0A0A6YYK7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.31■■□□□ 1.48
TRAV19A0A0A6YYK7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRAV19A0A0A6YYK7 MIR3621-201ENST00000580529 85 ntBASIC24.3■■□□□ 1.48
TRAV19A0A0A6YYK7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.3■■□□□ 1.48
TRAV19A0A0A6YYK7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.3■■□□□ 1.48
TRAV19A0A0A6YYK7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.29■■□□□ 1.48
TRAV19A0A0A6YYK7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRAV19A0A0A6YYK7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRAV19A0A0A6YYK7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRAV19A0A0A6YYK7 AC131281.2-201ENST00000520478 145 ntBASIC24.29■■□□□ 1.48
TRAV19A0A0A6YYK7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.29■■□□□ 1.48
TRAV19A0A0A6YYK7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.29■■□□□ 1.48
TRAV19A0A0A6YYK7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRAV19A0A0A6YYK7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.28■■□□□ 1.48
TRAV19A0A0A6YYK7 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.28■■□□□ 1.48
TRAV19A0A0A6YYK7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.28■■□□□ 1.48
TRAV19A0A0A6YYK7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.28■■□□□ 1.48
TRAV19A0A0A6YYK7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.28■■□□□ 1.48
TRAV19A0A0A6YYK7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.28■■□□□ 1.48
TRAV19A0A0A6YYK7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRAV19A0A0A6YYK7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
TRAV19A0A0A6YYK7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRAV19A0A0A6YYK7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRAV19A0A0A6YYK7 SNX5-217ENST00000606557 1087 ntBASIC24.27■■□□□ 1.48
TRAV19A0A0A6YYK7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRAV19A0A0A6YYK7 AC019069.1-201ENST00000610008 1333 ntBASIC24.27■■□□□ 1.48
TRAV19A0A0A6YYK7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRAV19A0A0A6YYK7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TRAV19A0A0A6YYK7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRAV19A0A0A6YYK7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRAV19A0A0A6YYK7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.25■■□□□ 1.47
TRAV19A0A0A6YYK7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.25■■□□□ 1.47
TRAV19A0A0A6YYK7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.25■■□□□ 1.47
TRAV19A0A0A6YYK7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRAV19A0A0A6YYK7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.25■■□□□ 1.47
TRAV19A0A0A6YYK7 DUSP8P4-201ENST00000399538 1761 ntBASIC24.24■■□□□ 1.47
TRAV19A0A0A6YYK7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.24■■□□□ 1.47
TRAV19A0A0A6YYK7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.24■■□□□ 1.47
TRAV19A0A0A6YYK7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRAV19A0A0A6YYK7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
TRAV19A0A0A6YYK7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRAV19A0A0A6YYK7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TRAV19A0A0A6YYK7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.23■■□□□ 1.47
TRAV19A0A0A6YYK7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRAV19A0A0A6YYK7 AL136116.3-201ENST00000402907 1138 ntBASIC24.23■■□□□ 1.47
TRAV19A0A0A6YYK7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TRAV19A0A0A6YYK7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
TRAV19A0A0A6YYK7 MIR6722-201ENST00000617286 78 ntBASIC24.23■■□□□ 1.47
TRAV19A0A0A6YYK7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.23■■□□□ 1.47
TRAV19A0A0A6YYK7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
TRAV19A0A0A6YYK7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRAV19A0A0A6YYK7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRAV19A0A0A6YYK7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRAV19A0A0A6YYK7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.22■■□□□ 1.47
TRAV19A0A0A6YYK7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRAV19A0A0A6YYK7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRAV19A0A0A6YYK7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRAV19A0A0A6YYK7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRAV19A0A0A6YYK7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRAV19A0A0A6YYK7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRAV19A0A0A6YYK7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRAV19A0A0A6YYK7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRAV19A0A0A6YYK7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRAV19A0A0A6YYK7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.21■■□□□ 1.47
TRAV19A0A0A6YYK7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.21■■□□□ 1.47
TRAV19A0A0A6YYK7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRAV19A0A0A6YYK7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRAV19A0A0A6YYK7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
TRAV19A0A0A6YYK7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.2■■□□□ 1.46
TRAV19A0A0A6YYK7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.2■■□□□ 1.46
TRAV19A0A0A6YYK7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.2■■□□□ 1.46
TRAV19A0A0A6YYK7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
TRAV19A0A0A6YYK7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRAV19A0A0A6YYK7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRAV19A0A0A6YYK7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRAV19A0A0A6YYK7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRAV19A0A0A6YYK7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
TRAV19A0A0A6YYK7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRAV19A0A0A6YYK7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.19■■□□□ 1.46
TRAV19A0A0A6YYK7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRAV19A0A0A6YYK7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms