Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 CCT7P1-201ENST00000406551 1611 ntBASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 AC055811.4-201ENST00000624039 1754 ntBASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 UNC93B8-201ENST00000511903 705 ntBASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 KRT8P49-201ENST00000604166 1432 ntBASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 ACE3P-201ENST00000423435 1973 ntBASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 AC016397.2-201ENST00000624848 1985 ntBASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 AC018445.4-201ENST00000624066 2291 ntBASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LINC01558Q9Y6Z2 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 AC092053.3-201ENST00000641308 4975 ntBASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 AC145098.2-201ENST00000623593 3026 ntBASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms