Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 AC074338.1-201ENST00000416825 156 ntBASIC17.98■□□□□ 0.47
CLIC4Q9Y696 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 AL079307.3-201ENST00000556114 283 ntBASIC17.98■□□□□ 0.47
CLIC4Q9Y696 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 AP001059.3-201ENST00000619053 235 ntBASIC17.98■□□□□ 0.47
CLIC4Q9Y696 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.98■□□□□ 0.47
CLIC4Q9Y696 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 AL035456.1-201ENST00000456064 1369 ntBASIC17.97■□□□□ 0.47
CLIC4Q9Y696 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLIC4Q9Y696 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms