Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00588Q9Y4M8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 OR8S1-201ENST00000310194 1080 ntBASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 U91328.1-201ENST00000437528 223 ntBASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 RPL13AP25-201ENST00000484130 612 ntBASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 BRI3BPP1-201ENST00000594224 787 ntBASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00588Q9Y4M8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
LINC00588Q9Y4M8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
LINC00588Q9Y4M8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00588Q9Y4M8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00588Q9Y4M8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00588Q9Y4M8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AC134915.1-201ENST00000426461 574 ntBASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AC007389.4-201ENST00000454674 793 ntBASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 HNRNPA1P13-201ENST00000510646 963 ntBASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AL359711.2-201ENST00000563105 872 ntBASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 AL049840.4-201ENST00000602422 811 ntBASIC10.77□□□□□ -0.69
LINC00588Q9Y4M8 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms