Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
UBE2D4Q9Y2X8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
UBE2D4Q9Y2X8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2D4Q9Y2X8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2D4Q9Y2X8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2D4Q9Y2X8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2D4Q9Y2X8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.64
UBE2D4Q9Y2X8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2D4Q9Y2X8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2D4Q9Y2X8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
UBE2D4Q9Y2X8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.02□□□□□ -0.64
UBE2D4Q9Y2X8 AC007686.3-201ENST00000619017 3487 ntBASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 RHOQP3-201ENST00000437982 621 ntBASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 AC023141.13-201ENST00000604991 943 ntBASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 AL445228.2-201ENST00000605589 952 ntBASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2D4Q9Y2X8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 AC004987.2-201ENST00000395959 1148 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms