Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 AC025580.3-201ENST00000617932 1424 ntBASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 AC245100.5-201ENST00000452108 331 ntBASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 AC004877.2-201ENST00000623941 599 ntBASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 PMS2P7-201ENST00000506558 1336 ntBASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB4Q9UN71 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 AC117489.1-201ENST00000625169 3217 ntBASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 AC015656.1-201ENST00000624209 3578 ntBASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB4Q9UN71 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms