Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 AL391069.4-201ENST00000609583 481 ntBASIC14.48□□□□□ -0.09
LRFN1Q9P244 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 AC011477.6-201ENST00000604980 1927 ntBASIC14.47□□□□□ -0.09
LRFN1Q9P244 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 AC018892.3-201ENST00000623986 2499 ntBASIC14.47□□□□□ -0.09
LRFN1Q9P244 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 KRT18P64-201ENST00000434946 1219 ntBASIC14.47□□□□□ -0.09
LRFN1Q9P244 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 FAM86LP-201ENST00000478302 853 ntBASIC14.47□□□□□ -0.09
LRFN1Q9P244 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRFN1Q9P244 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LRFN1Q9P244 AL607033.1-201ENST00000623900 1599 ntBASIC14.47□□□□□ -0.09
LRFN1Q9P244 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 AC007389.4-201ENST00000454674 793 ntBASIC14.46□□□□□ -0.09
LRFN1Q9P244 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms