Protein–RNA interactions for Protein: Q9NUM4

TMEM106B, Transmembrane protein 106B, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106BQ9NUM4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 SPTLC1P1-201ENST00000447199 261 ntBASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 TIMM17BP1-201ENST00000545713 516 ntBASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 AC104640.1-201ENST00000562617 2109 ntBASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 LINC02084-201ENST00000606069 1096 ntBASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM106BQ9NUM4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 DOC2GP-202ENST00000514950 1163 ntBASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 PAUPAR-201ENST00000630360 2965 ntBASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 DBET-201ENST00000630918 3363 ntBASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM106BQ9NUM4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.36□□□□□ -0.27
TMEM106BQ9NUM4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms