Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCDHB16Q9NRJ7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PCDHB16Q9NRJ7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCDHB16Q9NRJ7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.83□□□□□ -0.2
PCDHB16Q9NRJ7 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PCDHB16Q9NRJ7 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCDHB16Q9NRJ7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
PCDHB16Q9NRJ7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 AC016027.1-202ENST00000607927 1699 ntBASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCDHB16Q9NRJ7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 RHOQP3-201ENST00000437982 621 ntBASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 MIR4321-201ENST00000592276 80 ntBASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms